nsv589110
- Organism: Homo sapiens
- Study:nstd54 (Cooper et al. 2011)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:2,218
- Publication(s):Cooper et al. 2011
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 313 SVs from 55 studies. See in: genome view
Overlapping variant regions from other studies: 313 SVs from 55 studies. See in: genome view
Overlapping variant regions from other studies: 139 SVs from 17 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv589110 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000022.11 | Chr22 | 44,739,384 | 44,741,601 |
| nsv589110 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000022.10 | Chr22 | 45,135,264 | 45,137,481 |
| nsv589110 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000022.9 | Chr22 | 43,513,928 | 43,516,145 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv957190 | copy number loss | SNP array | SNP genotyping analysis |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv957190 | Remapped | Perfect | NC_000022.11:g.(?_ 44739384)_(4474160 1_?)del | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 44,739,384 | 44,741,601 |
| nssv957190 | Remapped | Perfect | NC_000022.10:g.(?_ 45135264)_(4513748 1_?)del | GRCh37.p13 | First Pass | NC_000022.10 | Chr22 | 45,135,264 | 45,137,481 |
| nssv957190 | Submitted genomic | NC_000022.9:g.(?_4 3513928)_(43516145 _?)del | NCBI36 (hg18) | NC_000022.9 | Chr22 | 43,513,928 | 43,516,145 |