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dbVar

Database of genomic structural variation

nsv5889964

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:652

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 150 SVs from 40 studies. See in: genome view

Submitted genomic74,516,201-74,516,852

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5889964	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000003.12	Chr3	74,516,201	74,516,852
nsv5889964	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000003.11	Chr3	74,565,352	74,566,003

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17412717	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17412717	Submitted genomic		NC_000003.12:g.745 16201_74516852del	GRCh38 (hg38)		NC_000003.12	Chr3	74,516,201	74,516,852
nssv17412717	Remapped	Perfect	NC_000003.11:g.745 65352_74566003del	GRCh37.p13	First Pass	NC_000003.11	Chr3	74,565,352	74,566,003

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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