nsv5877274
- Organism: Homo sapiens
- Study:nstd209 (Almarri et al. 2020)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh38
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:4,367,761
- Publication(s):Almarri et al. 2020
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 5903 SVs from 96 studies. See in: genome view
Overlapping variant regions from other studies: 1213 SVs from 34 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv5877274 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000023.11 | ChrX | 48,251,965 | 52,619,725 | ||
| nsv5877274 | Remapped | Pass | GRCh37.p13 | PATCHES | First Pass | NW_004070877.1 | ChrX|NW_00 4070877.1 | 1 | 2,332,840 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv17465950 | deletion | Sequencing | Sequence alignment |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv17465950 | Submitted genomic | NC_000023.11:g.482 51965_52619725del | GRCh38 (hg38) | NC_000023.11 | ChrX | 48,251,965 | 52,619,725 | ||
| nssv17465950 | Remapped | Pass | NW_004070877.1:g.1 _2332840del | GRCh37.p13 | First Pass | NW_004070877.1 | ChrX|NW_00 4070877.1 | 1 | 2,332,840 |