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dbVar

Database of genomic structural variation

nsv5868578

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:372

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 169 SVs from 34 studies. See in: genome view

Submitted genomic99,899,462-99,899,833

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5868578	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000001.11	Chr1	99,899,462	99,899,833
nsv5868578	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000001.10	Chr1	100,365,018	100,365,389

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17405620	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17405620	Submitted genomic		NC_000001.11:g.998 99462_99899833del	GRCh38 (hg38)		NC_000001.11	Chr1	99,899,462	99,899,833
nssv17405620	Remapped	Perfect	NC_000001.10:g.100 365018_100365389de l	GRCh37.p13	First Pass	NC_000001.10	Chr1	100,365,018	100,365,389

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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