nsv579337
- Organism: Homo sapiens
- Study:nstd54 (Cooper et al. 2011)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:9
- Validation:Not tested
- Clinical Assertions: No
- Region Size:652
- Publication(s):Cooper et al. 2011
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 155 SVs from 20 studies. See in: genome view
Overlapping variant regions from other studies: 155 SVs from 20 studies. See in: genome view
Overlapping variant regions from other studies: 58 SVs from 10 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv579337 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000019.10 | Chr19 | 33,621,709 | 33,622,360 |
| nsv579337 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000019.9 | Chr19 | 34,112,615 | 34,113,266 |
| nsv579337 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000019.8 | Chr19 | 38,804,455 | 38,805,106 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv898546 | copy number gain | SNP array | SNP genotyping analysis |
| nssv898547 | copy number gain | SNP array | SNP genotyping analysis |
| nssv898548 | copy number gain | SNP array | SNP genotyping analysis |
| nssv898549 | copy number gain | SNP array | SNP genotyping analysis |
| nssv898550 | copy number gain | SNP array | SNP genotyping analysis |
| nssv898551 | copy number gain | SNP array | SNP genotyping analysis |
| nssv898552 | copy number gain | SNP array | SNP genotyping analysis |
| nssv898553 | copy number gain | SNP array | SNP genotyping analysis |
| nssv898554 | copy number gain | SNP array | SNP genotyping analysis |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv898546 | Remapped | Perfect | NC_000019.10:g.(?_ 33621709)_(3362236 0_?)dup | GRCh38.p12 | First Pass | NC_000019.10 | Chr19 | 33,621,709 | 33,622,360 |
| nssv898547 | Remapped | Perfect | NC_000019.10:g.(?_ 33621709)_(3362236 0_?)dup | GRCh38.p12 | First Pass | NC_000019.10 | Chr19 | 33,621,709 | 33,622,360 |
| nssv898548 | Remapped | Perfect | NC_000019.10:g.(?_ 33621709)_(3362236 0_?)dup | GRCh38.p12 | First Pass | NC_000019.10 | Chr19 | 33,621,709 | 33,622,360 |
| nssv898549 | Remapped | Perfect | NC_000019.10:g.(?_ 33621709)_(3362236 0_?)dup | GRCh38.p12 | First Pass | NC_000019.10 | Chr19 | 33,621,709 | 33,622,360 |
| nssv898550 | Remapped | Perfect | NC_000019.10:g.(?_ 33621709)_(3362236 0_?)dup | GRCh38.p12 | First Pass | NC_000019.10 | Chr19 | 33,621,709 | 33,622,360 |
| nssv898551 | Remapped | Perfect | NC_000019.10:g.(?_ 33621709)_(3362236 0_?)dup | GRCh38.p12 | First Pass | NC_000019.10 | Chr19 | 33,621,709 | 33,622,360 |
| nssv898552 | Remapped | Perfect | NC_000019.10:g.(?_ 33621709)_(3362236 0_?)dup | GRCh38.p12 | First Pass | NC_000019.10 | Chr19 | 33,621,709 | 33,622,360 |
| nssv898553 | Remapped | Perfect | NC_000019.10:g.(?_ 33621709)_(3362236 0_?)dup | GRCh38.p12 | First Pass | NC_000019.10 | Chr19 | 33,621,709 | 33,622,360 |
| nssv898554 | Remapped | Perfect | NC_000019.10:g.(?_ 33621709)_(3362236 0_?)dup | GRCh38.p12 | First Pass | NC_000019.10 | Chr19 | 33,621,709 | 33,622,360 |
| nssv898546 | Remapped | Perfect | NC_000019.9:g.(?_3 4112615)_(34113266 _?)dup | GRCh37.p13 | First Pass | NC_000019.9 | Chr19 | 34,112,615 | 34,113,266 |
| nssv898547 | Remapped | Perfect | NC_000019.9:g.(?_3 4112615)_(34113266 _?)dup | GRCh37.p13 | First Pass | NC_000019.9 | Chr19 | 34,112,615 | 34,113,266 |
| nssv898548 | Remapped | Perfect | NC_000019.9:g.(?_3 4112615)_(34113266 _?)dup | GRCh37.p13 | First Pass | NC_000019.9 | Chr19 | 34,112,615 | 34,113,266 |
| nssv898549 | Remapped | Perfect | NC_000019.9:g.(?_3 4112615)_(34113266 _?)dup | GRCh37.p13 | First Pass | NC_000019.9 | Chr19 | 34,112,615 | 34,113,266 |
| nssv898550 | Remapped | Perfect | NC_000019.9:g.(?_3 4112615)_(34113266 _?)dup | GRCh37.p13 | First Pass | NC_000019.9 | Chr19 | 34,112,615 | 34,113,266 |
| nssv898551 | Remapped | Perfect | NC_000019.9:g.(?_3 4112615)_(34113266 _?)dup | GRCh37.p13 | First Pass | NC_000019.9 | Chr19 | 34,112,615 | 34,113,266 |
| nssv898552 | Remapped | Perfect | NC_000019.9:g.(?_3 4112615)_(34113266 _?)dup | GRCh37.p13 | First Pass | NC_000019.9 | Chr19 | 34,112,615 | 34,113,266 |
| nssv898553 | Remapped | Perfect | NC_000019.9:g.(?_3 4112615)_(34113266 _?)dup | GRCh37.p13 | First Pass | NC_000019.9 | Chr19 | 34,112,615 | 34,113,266 |
| nssv898554 | Remapped | Perfect | NC_000019.9:g.(?_3 4112615)_(34113266 _?)dup | GRCh37.p13 | First Pass | NC_000019.9 | Chr19 | 34,112,615 | 34,113,266 |
| nssv898546 | Submitted genomic | NC_000019.8:g.(?_3 8804455)_(38805106 _?)dup | NCBI36 (hg18) | NC_000019.8 | Chr19 | 38,804,455 | 38,805,106 | ||
| nssv898547 | Submitted genomic | NC_000019.8:g.(?_3 8804455)_(38805106 _?)dup | NCBI36 (hg18) | NC_000019.8 | Chr19 | 38,804,455 | 38,805,106 | ||
| nssv898548 | Submitted genomic | NC_000019.8:g.(?_3 8804455)_(38805106 _?)dup | NCBI36 (hg18) | NC_000019.8 | Chr19 | 38,804,455 | 38,805,106 | ||
| nssv898549 | Submitted genomic | NC_000019.8:g.(?_3 8804455)_(38805106 _?)dup | NCBI36 (hg18) | NC_000019.8 | Chr19 | 38,804,455 | 38,805,106 | ||
| nssv898550 | Submitted genomic | NC_000019.8:g.(?_3 8804455)_(38805106 _?)dup | NCBI36 (hg18) | NC_000019.8 | Chr19 | 38,804,455 | 38,805,106 | ||
| nssv898551 | Submitted genomic | NC_000019.8:g.(?_3 8804455)_(38805106 _?)dup | NCBI36 (hg18) | NC_000019.8 | Chr19 | 38,804,455 | 38,805,106 | ||
| nssv898552 | Submitted genomic | NC_000019.8:g.(?_3 8804455)_(38805106 _?)dup | NCBI36 (hg18) | NC_000019.8 | Chr19 | 38,804,455 | 38,805,106 | ||
| nssv898553 | Submitted genomic | NC_000019.8:g.(?_3 8804455)_(38805106 _?)dup | NCBI36 (hg18) | NC_000019.8 | Chr19 | 38,804,455 | 38,805,106 | ||
| nssv898554 | Submitted genomic | NC_000019.8:g.(?_3 8804455)_(38805106 _?)dup | NCBI36 (hg18) | NC_000019.8 | Chr19 | 38,804,455 | 38,805,106 |