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dbVar

Database of genomic structural variation

nsv5665112

Organism: Homo sapiens

Study:nstd207 (Ebert et al. 2021)
Variant Type:inversion
Method Type:Optical mapping, Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:1,703,325

Publication(s):Ebert et al. 2021

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 5394 SVs from 119 studies. See in: genome view

Submitted genomic16,801,285-18,514,107

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5665112	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000017.11	Chr17	16,806,184 (-4899, +4899)	18,509,508 (-4599, +4599)
nsv5665112	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000017.10	Chr17	16,709,498 (-4899, +4899)	18,412,822 (-4599, +4599)

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17083287	inversion	Optical mapping, Sequencing	Optical mapping, Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17083287	Submitted genomic		NC_000017.11:g.(16 801285_16811083)_( 18504909_18514107) inv	GRCh38 (hg38)		NC_000017.11	Chr17	16,806,184 (-4899, +4899)	18,509,508 (-4599, +4599)
nssv17083287	Remapped	Perfect	NC_000017.10:g.(16 704599_16714397)_( 18408223_18417421) inv	GRCh37.p13	First Pass	NC_000017.10	Chr17	16,709,498 (-4899, +4899)	18,412,822 (-4599, +4599)

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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