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dbVar

Database of genomic structural variation

nsv5590200

Organism: Homo sapiens

Study:nstd207 (Ebert et al. 2021)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:3,840

Publication(s):Ebert et al. 2021

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 373 SVs from 66 studies. See in: genome view

Submitted genomic27,349,327-27,353,166

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5590200	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000010.11	Chr10	27,349,327	27,353,166
nsv5590200	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000010.10	Chr10	27,638,256	27,642,095

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv17070321	deletion	HG03486	Sequencing	Sequence alignment	4,355

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17070321	Submitted genomic		NC_000010.11:g.273 49327_27353166delT	GRCh38 (hg38)		NC_000010.11	Chr10	27,349,327	27,353,166
nssv17070321	Remapped	Perfect	NC_000010.10:g.276 38256_27642095delT	GRCh37.p13	First Pass	NC_000010.10	Chr10	27,638,256	27,642,095

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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