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dbVar

Database of genomic structural variation

nsv5588420

Organism: Homo sapiens

Study:nstd207 (Ebert et al. 2021)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:188

Publication(s):Ebert et al. 2021

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 134 SVs from 31 studies. See in: genome view

Submitted genomic42,815,826-42,816,013

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5588420	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000015.10	Chr15	42,815,826	42,816,013
nsv5588420	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000015.9	Chr15	43,108,024	43,108,211

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv17096626	deletion	HG03065	Sequencing	Sequence alignment	3,836

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17096626	Submitted genomic		NC_000015.10:g.428 15826_42816013delC	GRCh38 (hg38)		NC_000015.10	Chr15	42,815,826	42,816,013
nssv17096626	Remapped	Perfect	NC_000015.9:g.4310 8024_43108211delC	GRCh37.p13	First Pass	NC_000015.9	Chr15	43,108,024	43,108,211

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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