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dbVar

Database of genomic structural variation

nsv5541349

Organism: Homo sapiens

Study:nstd206 (Byrska-Bishop et al. 2022)
Variant Type:insertion
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:1

Publication(s):Byrska-Bishop et al. 2022

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 187 SVs from 33 studies. See in: genome view

Submitted genomic2,214,735-2,214,735

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5541349	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000012.12	Chr12	2,214,735	2,214,735
nsv5541349	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000012.11	Chr12	2,323,901	2,323,901

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17054854	insertion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17054854	Submitted genomic		NC_000012.12:g.221 4735_2214736ins132 6	GRCh38 (hg38)		NC_000012.12	Chr12	2,214,735	2,214,735
nssv17054854	Remapped	Perfect	NC_000012.11:g.232 3901_2323902ins132 6	GRCh37.p13	First Pass	NC_000012.11	Chr12	2,323,901	2,323,901

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv17054854	0.466	2925	6276

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