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dbVar

Database of genomic structural variation

nsv5539780

Organism: Homo sapiens

Study:nstd206 (Byrska-Bishop et al. 2022)
Variant Type:insertion
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:36

Publication(s):Byrska-Bishop et al. 2022

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 81 SVs from 20 studies. See in: genome view

Submitted genomic44,942,039-44,942,074

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5539780	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000011.10	Chr11	44,942,039	44,942,074
nsv5539780	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000011.9	Chr11	44,963,590	44,963,625

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17046146	insertion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17046146	Submitted genomic		NC_000011.10:g.449 42039_44942074ins1 40	GRCh38 (hg38)		NC_000011.10	Chr11	44,942,039	44,942,074
nssv17046146	Remapped	Perfect	NC_000011.9:g.4496 3590_44963625ins14 0	GRCh37.p13	First Pass	NC_000011.9	Chr11	44,963,590	44,963,625

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv17046146	0.228	1460	6398

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