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dbVar

Database of genomic structural variation

nsv552875

Organism: Homo sapiens

Study:nstd54 (Cooper et al. 2011)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:NCBI36 (hg18)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:3,026

Publication(s):Cooper et al. 2011

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 320 SVs from 40 studies. See in: genome view

Remapped(Score: Perfect):828,784-831,809

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv552875	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000011.10	Chr11	828,784	831,809
nsv552875	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000011.9	Chr11	828,784	831,809
nsv552875	Submitted genomic		NCBI36 (hg18)	Primary Assembly		NC_000011.8	Chr11	818,784	821,809

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv763570	copy number loss	SNP array	SNP genotyping analysis

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv763570	Remapped	Perfect	NC_000011.10:g.(?_ 828784)_(831809_?) del	GRCh38.p12	First Pass	NC_000011.10	Chr11	828,784	831,809
nssv763570	Remapped	Perfect	NC_000011.9:g.(?_8 28784)_(831809_?)d el	GRCh37.p13	First Pass	NC_000011.9	Chr11	828,784	831,809
nssv763570	Submitted genomic		NC_000011.8:g.(?_8 18784)_(821809_?)d el	NCBI36 (hg18)		NC_000011.8	Chr11	818,784	821,809

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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