nsv5511223
- Organism: Homo sapiens
- Study:nstd206 (Byrska-Bishop et al. 2022)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh38
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1,122
- Publication(s):Byrska-Bishop et al. 2022
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 121 SVs from 29 studies. See in: genome view
Overlapping variant regions from other studies: 121 SVs from 29 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv5511223 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000010.11 | Chr10 | 114,943,486 (-45, +40) | 114,944,607 (-40, +48) | ||
| nsv5511223 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000010.10 | Chr10 | 116,703,245 (-45, +40) | 116,704,366 (-40, +48) |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv17039242 | deletion | Sequencing | Sequence alignment |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv17039242 | Submitted genomic | NC_000010.11:g.(11 4943441_114943526) _(114944567_114944 655)del | GRCh38 (hg38) | NC_000010.11 | Chr10 | 114,943,486 (-45, +40) | 114,944,607 (-40, +48) | ||
| nssv17039242 | Remapped | Perfect | NC_000010.10:g.(11 6703200_116703285) _(116704326_116704 414)del | GRCh37.p13 | First Pass | NC_000010.10 | Chr10 | 116,703,245 (-45, +40) | 116,704,366 (-40, +48) |
No validation data were submitted for this variant
No clinical assertion data were submitted for this variant
Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.
Genotype Information
| Variant Call ID | Allele Frequency (AF) | Allele Count (AC) | Allele Number (AN) |
|---|---|---|---|
| nssv17039242 | <0.001 | 2 | 6404 |