U.S. flag

An official website of the United States government

nsv5301271

  • Variant Calls:1
  • Validation:Not tested
  • Clinical Assertions: No
  • Region Size:266,100

Links to Other Resources

Source: NCBI

Genome View

Select assembly:
Overlapping variant regions from other studies: 650 SVs from 62 studies. See in: genome view    
Submitted genomic53,746,133-54,012,285Question Mark
Overlapping variant regions from other studies: 650 SVs from 62 studies. See in: genome view    
Remapped(Score: Perfect):53,780,045-54,046,197Question Mark

Variant Region Placement Information

Variant Region IDPlacement TypeScoreAssemblyAssembly UnitReciprocitySequence IDChrStartStop
nsv5301271Submitted genomicGRCh38.p13Primary AssemblyNC_000016.10Chr1653,746,157 (-24, +23)54,012,256 (-30, +29)
nsv5301271RemappedPerfectGRCh37.p13Primary AssemblyFirst PassNC_000016.9Chr1653,780,069 (-24, +23)54,046,168 (-30, +29)

Variant Call Information

Variant Call IDTypeMethodAnalysis
nssv16751822deletionSequencingSplit read and paired-end mapping

Variant Call Placement Information

Variant Call IDPlacement TypeScoreHGVSAssemblyReciprocitySequence IDChrStartStop
nssv16751822Submitted genomicNC_000016.10:g.(53
746133_53746180)_(
54012226_54012285)
del
GRCh38.p13NC_000016.10Chr1653,746,157 (-24, +23)54,012,256 (-30, +29)
nssv16751822RemappedPerfectNC_000016.9:g.(537
80045_53780092)_(5
4046138_54046197)d
el
GRCh37.p13First PassNC_000016.9Chr1653,780,069 (-24, +23)54,046,168 (-30, +29)

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call IDAllele Frequency (AF)
nssv16751822<0.001
Support Center