nsv526224
- Organism: Homo sapiens
- Study:nstd21 (Shaikh et al. 2009)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI35 (hg17)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:66,835
- Publication(s):Shaikh et al. 2009
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 161 SVs from 36 studies. See in: genome view
Overlapping variant regions from other studies: 161 SVs from 36 studies. See in: genome view
Overlapping variant regions from other studies: 8 SVs from 3 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv526224 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000005.10 | Chr5 | 151,003,841 | 151,070,675 |
| nsv526224 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000005.9 | Chr5 | 150,383,403 | 150,450,236 |
| nsv526224 | Submitted genomic | NCBI35 (hg17) | Primary Assembly | NC_000005.8 | Chr5 | 150,363,596 | 150,430,429 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv702490 | copy number gain | SNP array | SNP genotyping analysis |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv702490 | Remapped | Good | NC_000005.10:g.(?_ 151003841)_(151070 675_?)dup | GRCh38.p12 | First Pass | NC_000005.10 | Chr5 | 151,003,841 | 151,070,675 |
| nssv702490 | Remapped | Perfect | NC_000005.9:g.(?_1 50383403)_(1504502 36_?)dup | GRCh37.p13 | First Pass | NC_000005.9 | Chr5 | 150,383,403 | 150,450,236 |
| nssv702490 | Submitted genomic | NC_000005.8:g.(?_1 50363596)_(1504304 29_?)dup | NCBI35 (hg17) | NC_000005.8 | Chr5 | 150,363,596 | 150,430,429 |