nsv526029
- Organism: Homo sapiens
- Study:nstd21 (Shaikh et al. 2009)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI35 (hg17)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:618,135
- Publication(s):Shaikh et al. 2009
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 3467 SVs from 104 studies. See in: genome view
Overlapping variant regions from other studies: 3616 SVs from 104 studies. See in: genome view
Overlapping variant regions from other studies: 89 SVs from 13 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv526029 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000002.12 | Chr2 | 131,975,708 | 132,593,842 |
| nsv526029 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000002.11 | Chr2 | 132,733,281 | 133,351,415 |
| nsv526029 | Submitted genomic | NCBI35 (hg17) | Primary Assembly | NC_000002.9 | Chr2 | 132,567,013 | 133,185,147 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv702260 | copy number gain | SNP array | SNP genotyping analysis |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv702260 | Remapped | Perfect | NC_000002.12:g.(?_ 131975708)_(132593 842_?)dup | GRCh38.p12 | First Pass | NC_000002.12 | Chr2 | 131,975,708 | 132,593,842 |
| nssv702260 | Remapped | Perfect | NC_000002.11:g.(?_ 132733281)_(133351 415_?)dup | GRCh37.p13 | First Pass | NC_000002.11 | Chr2 | 132,733,281 | 133,351,415 |
| nssv702260 | Submitted genomic | NC_000002.9:g.(?_1 32567013)_(1331851 47_?)dup | NCBI35 (hg17) | NC_000002.9 | Chr2 | 132,567,013 | 133,185,147 |