nsv521581
- Organism: Homo sapiens
- Study:nstd21 (Shaikh et al. 2009)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI35 (hg17)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:646,155
- Publication(s):Shaikh et al. 2009
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 3987 SVs from 110 studies. See in: genome view
Overlapping variant regions from other studies: 3987 SVs from 110 studies. See in: genome view
Overlapping variant regions from other studies: 138 SVs from 14 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv521581 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000011.10 | Chr11 | 134,126,584 | 134,772,738 |
| nsv521581 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000011.9 | Chr11 | 133,996,479 | 134,642,632 |
| nsv521581 | Submitted genomic | NCBI35 (hg17) | Primary Assembly | NC_000011.8 | Chr11 | 133,501,689 | 134,147,842 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv698196 | copy number gain | SNP array | SNP genotyping analysis |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv698196 | Remapped | Perfect | NC_000011.10:g.(?_ 134126584)_(134772 738_?)dup | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 134,126,584 | 134,772,738 |
| nssv698196 | Remapped | Perfect | NC_000011.9:g.(?_1 33996479)_(1346426 32_?)dup | GRCh37.p13 | First Pass | NC_000011.9 | Chr11 | 133,996,479 | 134,642,632 |
| nssv698196 | Submitted genomic | NC_000011.8:g.(?_1 33501689)_(1341478 42_?)dup | NCBI35 (hg17) | NC_000011.8 | Chr11 | 133,501,689 | 134,147,842 |