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dbVar

Database of genomic structural variation

nsv4944147

Organism: Homo sapiens

Study:nstd200 (Abel et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:11,000

Publication(s):Abel et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 504 SVs from 50 studies. See in: genome view

Submitted genomic186,081,093-186,092,256

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv4944147	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000004.12	Chr4	186,081,153 (-60, +2)	186,092,152 (-2, +104)
nsv4944147	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000004.11	Chr4	187,002,307 (-60, +2)	187,013,306 (-2, +104)

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv16473912	duplication	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv16473912	Submitted genomic		NC_000004.12:g.(18 6081093_186081155) _(186092150_186092 256)dup	GRCh38 (hg38)		NC_000004.12	Chr4	186,081,153 (-60, +2)	186,092,152 (-2, +104)
nssv16473912	Remapped	Perfect	NC_000004.11:g.(18 7002247_187002309) _(187013304_187013 410)dup	GRCh37.p13	First Pass	NC_000004.11	Chr4	187,002,307 (-60, +2)	187,013,306 (-2, +104)

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv16473912	<0.001	1	29246

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