nsv4729915
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:7,812,725
- Description:GRCh37/hg19 18p11.23-11.1(chr18:7598173-15422644)x1 AND not provided
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 22846 SVs from 121 studies. See in: genome view
Overlapping variant regions from other studies: 22886 SVs from 121 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4729915 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000018.10 | Chr18 | 7,598,175 | 15,410,899 |
| nsv4729915 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000018.9 | Chr18 | 7,598,173 | 15,422,644 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv16254982 | copy number loss | Multiple | Multiple | not provided | Pathogenic | ClinVar | RCV001258695.1, VCV000979519.1 | 1 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv16254982 | Remapped | Good | NC_000018.10:g.(?_ 7598175)_(15410899 _?)del | GRCh38.p12 | First Pass | NC_000018.10 | Chr18 | 7,598,175 | 15,410,899 |
| nssv16254982 | Submitted genomic | NC_000018.9:g.(?_7 598173)_(15422644_ ?)del | GRCh37 (hg19) | NC_000018.9 | Chr18 | 7,598,173 | 15,422,644 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv16254982 | GRCh37: NC_000018.9:g.(?_7598173)_(15422644_?)del | copy number loss | germline | not provided | Pathogenic | ClinVar | RCV001258695.1, VCV000979519.1 | 1 |