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dbVar

Database of genomic structural variation

nsv4729766

Organism: Homo sapiens

Study:nstd102 (Clinical Structural Variants)
Variant Type:copy number variation
Method Type:Multiple
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: Yes
Region Size:52,186

Description:GRCh37/hg19 17p11.2(chr17:17216882-17269067)x1 AND not provided

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 392 SVs from 65 studies. See in: genome view

Remapped(Score: Perfect):17,313,568-17,365,753

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv4729766	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000017.11	Chr17	17,313,568	17,365,753
nsv4729766	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000017.10	Chr17	17,216,882	17,269,067

Variant Call Information

Variant Call ID	Type	Method	Analysis	Subject Phenotype	Clinical Interpretation	Source of Interpretation	ClinVar ID	Copy number
nssv16254266	copy number loss	Multiple	Multiple	not provided	Likely benign	ClinVar	RCV001259288.1, VCV000980112.1	1

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv16254266	Remapped	Perfect	NC_000017.11:g.(?_ 17313568)_(1736575 3_?)del	GRCh38.p12	First Pass	NC_000017.11	Chr17	17,313,568	17,365,753
nssv16254266	Submitted genomic		NC_000017.10:g.(?_ 17216882)_(1726906 7_?)del	GRCh37 (hg19)		NC_000017.10	Chr17	17,216,882	17,269,067

No validation data were submitted for this variant

Clinical Assertions

Variant Call ID	HGVS	Type	Allele Origin	Subject Phenotype	Clinical Interpretation	Source of Interpretation	ClinVar ID	Copy number
nssv16254266	GRCh37: NC_000017.10:g.(?_17216882)_(17269067_?)del	copy number loss	germline	not provided	Likely benign	ClinVar	RCV001259288.1, VCV000980112.1	1

No genotype data were submitted for this variant

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