nsv4729113
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:415,106
- Description:GRCh37/hg19 6q25.3(chr6:159998877-160413982)x3 AND not provided
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1442 SVs from 81 studies. See in: genome view
Overlapping variant regions from other studies: 1442 SVs from 81 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4729113 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000006.12 | Chr6 | 159,577,845 | 159,992,950 |
| nsv4729113 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000006.11 | Chr6 | 159,998,877 | 160,413,982 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv16255017 | copy number gain | Multiple | Multiple | not provided | Uncertain significance | ClinVar | RCV001258756.1, VCV000979580.1 | 3 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv16255017 | Remapped | Perfect | NC_000006.12:g.(?_ 159577845)_(159992 950_?)dup | GRCh38.p12 | First Pass | NC_000006.12 | Chr6 | 159,577,845 | 159,992,950 |
| nssv16255017 | Submitted genomic | NC_000006.11:g.(?_ 159998877)_(160413 982_?)dup | GRCh37 (hg19) | NC_000006.11 | Chr6 | 159,998,877 | 160,413,982 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv16255017 | GRCh37: NC_000006.11:g.(?_159998877)_(160413982_?)dup | copy number gain | germline | not provided | Uncertain significance | ClinVar | RCV001258756.1, VCV000979580.1 | 3 |