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nsv471678

  • Variant Calls:26
  • Validation:Not tested
  • Clinical Assertions: No
  • Region Size:164,004

Links to Other Resources

Source: NCBI

Genome View

Select assembly:
Overlapping variant regions from other studies: 754 SVs from 75 studies. See in: genome view    
Remapped(Score: Perfect):28,555,640-28,719,643Question Mark
Overlapping variant regions from other studies: 279 SVs from 48 studies. See in: genome view    
Remapped(Score: Good):831,431-995,433Question Mark
Overlapping variant regions from other studies: 447 SVs from 58 studies. See in: genome view    
Remapped(Score: Good):717,645-881,647Question Mark
Overlapping variant regions from other studies: 774 SVs from 75 studies. See in: genome view    
Remapped(Score: Perfect):28,800,786-28,964,789Question Mark
Overlapping variant regions from other studies: 2 SVs from 2 studies. See in: genome view    
Submitted genomic26,528,591-26,692,594Question Mark

Variant Region Placement Information

Variant Region IDPlacement TypeScoreAssemblyAssembly UnitReciprocitySequence IDChrInner StartInner Stop
nsv471678RemappedPerfectGRCh38.p12Primary AssemblyFirst PassNC_000015.10Chr1528,555,64028,719,643
nsv471678RemappedGoodGRCh38.p12ALT_REF_LOCI_2Second PassNT_187660.1Chr15|NT_1
87660.1
831,431995,433
nsv471678RemappedGoodGRCh38.p12PATCHESSecond PassNW_011332701.1Chr15|NW_0
11332701.1
717,645881,647
nsv471678RemappedPerfectGRCh37.p13Primary AssemblyFirst PassNC_000015.9Chr1528,800,78628,964,789
nsv471678Submitted genomicNCBI34 (hg16)Primary AssemblyNC_000015.7Chr1526,528,59126,692,594

Variant Call Information

Variant Call IDTypeSample IDMethodAnalysisOther Calls in this Sample and Study
nssv549953copy number lossGM10470ABAC aCGHProbe signal intensity49
nssv549954copy number lossGM10472ABAC aCGHProbe signal intensity51
nssv549955copy number lossGM10473ABAC aCGHProbe signal intensity44
nssv549956copy number lossGM10492ABAC aCGHProbe signal intensity47
nssv549957copy number lossGM10494ABAC aCGHProbe signal intensity55
nssv549958copy number lossGM10967BAC aCGHProbe signal intensity58
nssv549959copy number lossGM10969BAC aCGHProbe signal intensity51
nssv549960copy number lossGM10970BAC aCGHProbe signal intensity55
nssv549961copy number lossGM11323BAC aCGHProbe signal intensity53
nssv549962copy number lossGM11521BAC aCGHProbe signal intensity49
nssv549963copy number lossGM11523BAC aCGHProbe signal intensity54
nssv549964copy number lossGM11776BAC aCGHProbe signal intensity31
nssv549965copy number lossGM15730BAC aCGHProbe signal intensity49
nssv549966copy number lossGM15731BAC aCGHProbe signal intensity42
nssv549967copy number lossGM15732BAC aCGHProbe signal intensity56
nssv549968copy number lossGM16688BAC aCGHProbe signal intensity44
nssv549969copy number lossGM17015BAC aCGHProbe signal intensity60
nssv549970copy number lossGM17017BAC aCGHProbe signal intensity57
nssv549971copy number lossGM17020ABAC aCGHProbe signal intensity43
nssv549972copy number lossGM17051BAC aCGHProbe signal intensity54
nssv549973copy number lossGM17052BAC aCGHProbe signal intensity50
nssv549974copy number lossGM17059ABAC aCGHProbe signal intensity44
nssv549975copy number lossJK1051ABAC aCGHProbe signal intensity53
nssv549976copy number lossJK1058BBAC aCGHProbe signal intensity61
nssv549977copy number lossJK1061BAC aCGHProbe signal intensity51
nssv549978copy number lossP86GABAC aCGHProbe signal intensity50

Variant Call Placement Information

Variant Call IDPlacement TypeScoreHGVSAssemblyReciprocitySequence IDChrInner StartInner Stop
nssv549953RemappedGoodNT_187660.1:g.(?_8
31431)_(995433_?)d
el
GRCh38.p12Second PassNT_187660.1Chr15|NT_1
87660.1
831,431995,433
nssv549954RemappedGoodNT_187660.1:g.(?_8
31431)_(995433_?)d
el
GRCh38.p12Second PassNT_187660.1Chr15|NT_1
87660.1
831,431995,433
nssv549955RemappedGoodNT_187660.1:g.(?_8
31431)_(995433_?)d
el
GRCh38.p12Second PassNT_187660.1Chr15|NT_1
87660.1
831,431995,433
nssv549956RemappedGoodNT_187660.1:g.(?_8
31431)_(995433_?)d
el
GRCh38.p12Second PassNT_187660.1Chr15|NT_1
87660.1
831,431995,433
nssv549957RemappedGoodNT_187660.1:g.(?_8
31431)_(995433_?)d
el
GRCh38.p12Second PassNT_187660.1Chr15|NT_1
87660.1
831,431995,433
nssv549958RemappedGoodNT_187660.1:g.(?_8
31431)_(995433_?)d
el
GRCh38.p12Second PassNT_187660.1Chr15|NT_1
87660.1
831,431995,433
nssv549959RemappedGoodNT_187660.1:g.(?_8
31431)_(995433_?)d
el
GRCh38.p12Second PassNT_187660.1Chr15|NT_1
87660.1
831,431995,433
nssv549960RemappedGoodNT_187660.1:g.(?_8
31431)_(995433_?)d
el
GRCh38.p12Second PassNT_187660.1Chr15|NT_1
87660.1
831,431995,433
nssv549961RemappedGoodNT_187660.1:g.(?_8
31431)_(995433_?)d
el
GRCh38.p12Second PassNT_187660.1Chr15|NT_1
87660.1
831,431995,433
nssv549962RemappedGoodNT_187660.1:g.(?_8
31431)_(995433_?)d
el
GRCh38.p12Second PassNT_187660.1Chr15|NT_1
87660.1
831,431995,433
nssv549963RemappedGoodNT_187660.1:g.(?_8
31431)_(995433_?)d
el
GRCh38.p12Second PassNT_187660.1Chr15|NT_1
87660.1
831,431995,433
nssv549964RemappedGoodNT_187660.1:g.(?_8
31431)_(995433_?)d
el
GRCh38.p12Second PassNT_187660.1Chr15|NT_1
87660.1
831,431995,433
nssv549965RemappedGoodNT_187660.1:g.(?_8
31431)_(995433_?)d
el
GRCh38.p12Second PassNT_187660.1Chr15|NT_1
87660.1
831,431995,433
nssv549966RemappedGoodNT_187660.1:g.(?_8
31431)_(995433_?)d
el
GRCh38.p12Second PassNT_187660.1Chr15|NT_1
87660.1
831,431995,433
nssv549967RemappedGoodNT_187660.1:g.(?_8
31431)_(995433_?)d
el
GRCh38.p12Second PassNT_187660.1Chr15|NT_1
87660.1
831,431995,433
nssv549968RemappedGoodNT_187660.1:g.(?_8
31431)_(995433_?)d
el
GRCh38.p12Second PassNT_187660.1Chr15|NT_1
87660.1
831,431995,433
nssv549969RemappedGoodNT_187660.1:g.(?_8
31431)_(995433_?)d
el
GRCh38.p12Second PassNT_187660.1Chr15|NT_1
87660.1
831,431995,433
nssv549970RemappedGoodNT_187660.1:g.(?_8
31431)_(995433_?)d
el
GRCh38.p12Second PassNT_187660.1Chr15|NT_1
87660.1
831,431995,433
nssv549971RemappedGoodNT_187660.1:g.(?_8
31431)_(995433_?)d
el
GRCh38.p12Second PassNT_187660.1Chr15|NT_1
87660.1
831,431995,433
nssv549972RemappedGoodNT_187660.1:g.(?_8
31431)_(995433_?)d
el
GRCh38.p12Second PassNT_187660.1Chr15|NT_1
87660.1
831,431995,433
nssv549973RemappedGoodNT_187660.1:g.(?_8
31431)_(995433_?)d
el
GRCh38.p12Second PassNT_187660.1Chr15|NT_1
87660.1
831,431995,433
nssv549974RemappedGoodNT_187660.1:g.(?_8
31431)_(995433_?)d
el
GRCh38.p12Second PassNT_187660.1Chr15|NT_1
87660.1
831,431995,433
nssv549975RemappedGoodNT_187660.1:g.(?_8
31431)_(995433_?)d
el
GRCh38.p12Second PassNT_187660.1Chr15|NT_1
87660.1
831,431995,433
nssv549976RemappedGoodNT_187660.1:g.(?_8
31431)_(995433_?)d
el
GRCh38.p12Second PassNT_187660.1Chr15|NT_1
87660.1
831,431995,433
nssv549977RemappedGoodNT_187660.1:g.(?_8
31431)_(995433_?)d
el
GRCh38.p12Second PassNT_187660.1Chr15|NT_1
87660.1
831,431995,433
nssv549978RemappedGoodNT_187660.1:g.(?_8
31431)_(995433_?)d
el
GRCh38.p12Second PassNT_187660.1Chr15|NT_1
87660.1
831,431995,433
nssv549953RemappedGoodNW_011332701.1:g.(
?_717645)_(881647_
?)del
GRCh38.p12Second PassNW_011332701.1Chr15|NW_0
11332701.1
717,645881,647
nssv549954RemappedGoodNW_011332701.1:g.(
?_717645)_(881647_
?)del
GRCh38.p12Second PassNW_011332701.1Chr15|NW_0
11332701.1
717,645881,647
nssv549955RemappedGoodNW_011332701.1:g.(
?_717645)_(881647_
?)del
GRCh38.p12Second PassNW_011332701.1Chr15|NW_0
11332701.1
717,645881,647
nssv549956RemappedGoodNW_011332701.1:g.(
?_717645)_(881647_
?)del
GRCh38.p12Second PassNW_011332701.1Chr15|NW_0
11332701.1
717,645881,647
nssv549957RemappedGoodNW_011332701.1:g.(
?_717645)_(881647_
?)del
GRCh38.p12Second PassNW_011332701.1Chr15|NW_0
11332701.1
717,645881,647
nssv549958RemappedGoodNW_011332701.1:g.(
?_717645)_(881647_
?)del
GRCh38.p12Second PassNW_011332701.1Chr15|NW_0
11332701.1
717,645881,647
nssv549959RemappedGoodNW_011332701.1:g.(
?_717645)_(881647_
?)del
GRCh38.p12Second PassNW_011332701.1Chr15|NW_0
11332701.1
717,645881,647
nssv549960RemappedGoodNW_011332701.1:g.(
?_717645)_(881647_
?)del
GRCh38.p12Second PassNW_011332701.1Chr15|NW_0
11332701.1
717,645881,647
nssv549961RemappedGoodNW_011332701.1:g.(
?_717645)_(881647_
?)del
GRCh38.p12Second PassNW_011332701.1Chr15|NW_0
11332701.1
717,645881,647
nssv549962RemappedGoodNW_011332701.1:g.(
?_717645)_(881647_
?)del
GRCh38.p12Second PassNW_011332701.1Chr15|NW_0
11332701.1
717,645881,647
nssv549963RemappedGoodNW_011332701.1:g.(
?_717645)_(881647_
?)del
GRCh38.p12Second PassNW_011332701.1Chr15|NW_0
11332701.1
717,645881,647
nssv549964RemappedGoodNW_011332701.1:g.(
?_717645)_(881647_
?)del
GRCh38.p12Second PassNW_011332701.1Chr15|NW_0
11332701.1
717,645881,647
nssv549965RemappedGoodNW_011332701.1:g.(
?_717645)_(881647_
?)del
GRCh38.p12Second PassNW_011332701.1Chr15|NW_0
11332701.1
717,645881,647
nssv549966RemappedGoodNW_011332701.1:g.(
?_717645)_(881647_
?)del
GRCh38.p12Second PassNW_011332701.1Chr15|NW_0
11332701.1
717,645881,647
nssv549967RemappedGoodNW_011332701.1:g.(
?_717645)_(881647_
?)del
GRCh38.p12Second PassNW_011332701.1Chr15|NW_0
11332701.1
717,645881,647
nssv549968RemappedGoodNW_011332701.1:g.(
?_717645)_(881647_
?)del
GRCh38.p12Second PassNW_011332701.1Chr15|NW_0
11332701.1
717,645881,647
nssv549969RemappedGoodNW_011332701.1:g.(
?_717645)_(881647_
?)del
GRCh38.p12Second PassNW_011332701.1Chr15|NW_0
11332701.1
717,645881,647
nssv549970RemappedGoodNW_011332701.1:g.(
?_717645)_(881647_
?)del
GRCh38.p12Second PassNW_011332701.1Chr15|NW_0
11332701.1
717,645881,647
nssv549971RemappedGoodNW_011332701.1:g.(
?_717645)_(881647_
?)del
GRCh38.p12Second PassNW_011332701.1Chr15|NW_0
11332701.1
717,645881,647
nssv549972RemappedGoodNW_011332701.1:g.(
?_717645)_(881647_
?)del
GRCh38.p12Second PassNW_011332701.1Chr15|NW_0
11332701.1
717,645881,647
nssv549973RemappedGoodNW_011332701.1:g.(
?_717645)_(881647_
?)del
GRCh38.p12Second PassNW_011332701.1Chr15|NW_0
11332701.1
717,645881,647
nssv549974RemappedGoodNW_011332701.1:g.(
?_717645)_(881647_
?)del
GRCh38.p12Second PassNW_011332701.1Chr15|NW_0
11332701.1
717,645881,647
nssv549975RemappedGoodNW_011332701.1:g.(
?_717645)_(881647_
?)del
GRCh38.p12Second PassNW_011332701.1Chr15|NW_0
11332701.1
717,645881,647
nssv549976RemappedGoodNW_011332701.1:g.(
?_717645)_(881647_
?)del
GRCh38.p12Second PassNW_011332701.1Chr15|NW_0
11332701.1
717,645881,647
nssv549977RemappedGoodNW_011332701.1:g.(
?_717645)_(881647_
?)del
GRCh38.p12Second PassNW_011332701.1Chr15|NW_0
11332701.1
717,645881,647
nssv549978RemappedGoodNW_011332701.1:g.(
?_717645)_(881647_
?)del
GRCh38.p12Second PassNW_011332701.1Chr15|NW_0
11332701.1
717,645881,647
nssv549953RemappedPerfectNC_000015.10:g.(?_
28555640)_(2871964
3_?)del
GRCh38.p12First PassNC_000015.10Chr1528,555,64028,719,643
nssv549954RemappedPerfectNC_000015.10:g.(?_
28555640)_(2871964
3_?)del
GRCh38.p12First PassNC_000015.10Chr1528,555,64028,719,643
nssv549955RemappedPerfectNC_000015.10:g.(?_
28555640)_(2871964
3_?)del
GRCh38.p12First PassNC_000015.10Chr1528,555,64028,719,643
nssv549956RemappedPerfectNC_000015.10:g.(?_
28555640)_(2871964
3_?)del
GRCh38.p12First PassNC_000015.10Chr1528,555,64028,719,643
nssv549957RemappedPerfectNC_000015.10:g.(?_
28555640)_(2871964
3_?)del
GRCh38.p12First PassNC_000015.10Chr1528,555,64028,719,643
nssv549958RemappedPerfectNC_000015.10:g.(?_
28555640)_(2871964
3_?)del
GRCh38.p12First PassNC_000015.10Chr1528,555,64028,719,643
nssv549959RemappedPerfectNC_000015.10:g.(?_
28555640)_(2871964
3_?)del
GRCh38.p12First PassNC_000015.10Chr1528,555,64028,719,643
nssv549960RemappedPerfectNC_000015.10:g.(?_
28555640)_(2871964
3_?)del
GRCh38.p12First PassNC_000015.10Chr1528,555,64028,719,643
nssv549961RemappedPerfectNC_000015.10:g.(?_
28555640)_(2871964
3_?)del
GRCh38.p12First PassNC_000015.10Chr1528,555,64028,719,643
nssv549962RemappedPerfectNC_000015.10:g.(?_
28555640)_(2871964
3_?)del
GRCh38.p12First PassNC_000015.10Chr1528,555,64028,719,643
nssv549963RemappedPerfectNC_000015.10:g.(?_
28555640)_(2871964
3_?)del
GRCh38.p12First PassNC_000015.10Chr1528,555,64028,719,643
nssv549964RemappedPerfectNC_000015.10:g.(?_
28555640)_(2871964
3_?)del
GRCh38.p12First PassNC_000015.10Chr1528,555,64028,719,643
nssv549965RemappedPerfectNC_000015.10:g.(?_
28555640)_(2871964
3_?)del
GRCh38.p12First PassNC_000015.10Chr1528,555,64028,719,643
nssv549966RemappedPerfectNC_000015.10:g.(?_
28555640)_(2871964
3_?)del
GRCh38.p12First PassNC_000015.10Chr1528,555,64028,719,643
nssv549967RemappedPerfectNC_000015.10:g.(?_
28555640)_(2871964
3_?)del
GRCh38.p12First PassNC_000015.10Chr1528,555,64028,719,643
nssv549968RemappedPerfectNC_000015.10:g.(?_
28555640)_(2871964
3_?)del
GRCh38.p12First PassNC_000015.10Chr1528,555,64028,719,643
nssv549969RemappedPerfectNC_000015.10:g.(?_
28555640)_(2871964
3_?)del
GRCh38.p12First PassNC_000015.10Chr1528,555,64028,719,643
nssv549970RemappedPerfectNC_000015.10:g.(?_
28555640)_(2871964
3_?)del
GRCh38.p12First PassNC_000015.10Chr1528,555,64028,719,643
nssv549971RemappedPerfectNC_000015.10:g.(?_
28555640)_(2871964
3_?)del
GRCh38.p12First PassNC_000015.10Chr1528,555,64028,719,643
nssv549972RemappedPerfectNC_000015.10:g.(?_
28555640)_(2871964
3_?)del
GRCh38.p12First PassNC_000015.10Chr1528,555,64028,719,643
nssv549973RemappedPerfectNC_000015.10:g.(?_
28555640)_(2871964
3_?)del
GRCh38.p12First PassNC_000015.10Chr1528,555,64028,719,643
nssv549974RemappedPerfectNC_000015.10:g.(?_
28555640)_(2871964
3_?)del
GRCh38.p12First PassNC_000015.10Chr1528,555,64028,719,643
nssv549975RemappedPerfectNC_000015.10:g.(?_
28555640)_(2871964
3_?)del
GRCh38.p12First PassNC_000015.10Chr1528,555,64028,719,643
nssv549976RemappedPerfectNC_000015.10:g.(?_
28555640)_(2871964
3_?)del
GRCh38.p12First PassNC_000015.10Chr1528,555,64028,719,643
nssv549977RemappedPerfectNC_000015.10:g.(?_
28555640)_(2871964
3_?)del
GRCh38.p12First PassNC_000015.10Chr1528,555,64028,719,643
nssv549978RemappedPerfectNC_000015.10:g.(?_
28555640)_(2871964
3_?)del
GRCh38.p12First PassNC_000015.10Chr1528,555,64028,719,643
nssv549953RemappedPerfectNC_000015.9:g.(?_2
8800786)_(28964789
_?)del
GRCh37.p13First PassNC_000015.9Chr1528,800,78628,964,789
nssv549954RemappedPerfectNC_000015.9:g.(?_2
8800786)_(28964789
_?)del
GRCh37.p13First PassNC_000015.9Chr1528,800,78628,964,789
nssv549955RemappedPerfectNC_000015.9:g.(?_2
8800786)_(28964789
_?)del
GRCh37.p13First PassNC_000015.9Chr1528,800,78628,964,789
nssv549956RemappedPerfectNC_000015.9:g.(?_2
8800786)_(28964789
_?)del
GRCh37.p13First PassNC_000015.9Chr1528,800,78628,964,789
nssv549957RemappedPerfectNC_000015.9:g.(?_2
8800786)_(28964789
_?)del
GRCh37.p13First PassNC_000015.9Chr1528,800,78628,964,789
nssv549958RemappedPerfectNC_000015.9:g.(?_2
8800786)_(28964789
_?)del
GRCh37.p13First PassNC_000015.9Chr1528,800,78628,964,789
nssv549959RemappedPerfectNC_000015.9:g.(?_2
8800786)_(28964789
_?)del
GRCh37.p13First PassNC_000015.9Chr1528,800,78628,964,789
nssv549960RemappedPerfectNC_000015.9:g.(?_2
8800786)_(28964789
_?)del
GRCh37.p13First PassNC_000015.9Chr1528,800,78628,964,789
nssv549961RemappedPerfectNC_000015.9:g.(?_2
8800786)_(28964789
_?)del
GRCh37.p13First PassNC_000015.9Chr1528,800,78628,964,789
nssv549962RemappedPerfectNC_000015.9:g.(?_2
8800786)_(28964789
_?)del
GRCh37.p13First PassNC_000015.9Chr1528,800,78628,964,789
nssv549963RemappedPerfectNC_000015.9:g.(?_2
8800786)_(28964789
_?)del
GRCh37.p13First PassNC_000015.9Chr1528,800,78628,964,789
nssv549964RemappedPerfectNC_000015.9:g.(?_2
8800786)_(28964789
_?)del
GRCh37.p13First PassNC_000015.9Chr1528,800,78628,964,789
nssv549965RemappedPerfectNC_000015.9:g.(?_2
8800786)_(28964789
_?)del
GRCh37.p13First PassNC_000015.9Chr1528,800,78628,964,789
nssv549966RemappedPerfectNC_000015.9:g.(?_2
8800786)_(28964789
_?)del
GRCh37.p13First PassNC_000015.9Chr1528,800,78628,964,789
nssv549967RemappedPerfectNC_000015.9:g.(?_2
8800786)_(28964789
_?)del
GRCh37.p13First PassNC_000015.9Chr1528,800,78628,964,789
nssv549968RemappedPerfectNC_000015.9:g.(?_2
8800786)_(28964789
_?)del
GRCh37.p13First PassNC_000015.9Chr1528,800,78628,964,789
nssv549969RemappedPerfectNC_000015.9:g.(?_2
8800786)_(28964789
_?)del
GRCh37.p13First PassNC_000015.9Chr1528,800,78628,964,789
nssv549970RemappedPerfectNC_000015.9:g.(?_2
8800786)_(28964789
_?)del
GRCh37.p13First PassNC_000015.9Chr1528,800,78628,964,789
nssv549971RemappedPerfectNC_000015.9:g.(?_2
8800786)_(28964789
_?)del
GRCh37.p13First PassNC_000015.9Chr1528,800,78628,964,789
nssv549972RemappedPerfectNC_000015.9:g.(?_2
8800786)_(28964789
_?)del
GRCh37.p13First PassNC_000015.9Chr1528,800,78628,964,789
nssv549973RemappedPerfectNC_000015.9:g.(?_2
8800786)_(28964789
_?)del
GRCh37.p13First PassNC_000015.9Chr1528,800,78628,964,789
nssv549974RemappedPerfectNC_000015.9:g.(?_2
8800786)_(28964789
_?)del
GRCh37.p13First PassNC_000015.9Chr1528,800,78628,964,789
Showing 100 of 130

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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