nsv471625
- Organism: Homo sapiens
- Study:nstd32 (Sharp et al. 2005)
- Variant Type:copy number variation
- Method Type:BAC aCGH
- Submitted on:NCBI34 (hg16)
- Variant Calls:25
- Validation:Not tested
- Clinical Assertions: No
- Region Size:159,114
- Publication(s):Sharp et al. 2005
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1640 SVs from 105 studies. See in: genome view
Overlapping variant regions from other studies: 1640 SVs from 105 studies. See in: genome view
Overlapping variant regions from other studies: 7 SVs from 4 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv471625 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000004.12 | Chr4 | 69,250,956 | 69,410,069 |
| nsv471625 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000004.11 | Chr4 | 70,116,674 | 70,275,787 |
| nsv471625 | Submitted genomic | NCBI34 (hg16) | Primary Assembly | NC_000004.8 | Chr4 | 70,432,219 | 70,591,332 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv549285 | copy number loss | GM10469A | BAC aCGH | Probe signal intensity | 56 |
| nssv549286 | copy number loss | GM10470A | BAC aCGH | Probe signal intensity | 49 |
| nssv549287 | copy number loss | GM10492A | BAC aCGH | Probe signal intensity | 47 |
| nssv549288 | copy number loss | GM10493 | BAC aCGH | Probe signal intensity | 65 |
| nssv549289 | copy number loss | GM10494A | BAC aCGH | Probe signal intensity | 55 |
| nssv549290 | copy number loss | GM10495B | BAC aCGH | Probe signal intensity | 45 |
| nssv549291 | copy number loss | GM10496A | BAC aCGH | Probe signal intensity | 59 |
| nssv549292 | copy number loss | GM10967 | BAC aCGH | Probe signal intensity | 58 |
| nssv549293 | copy number loss | GM10970 | BAC aCGH | Probe signal intensity | 55 |
| nssv549294 | copy number loss | GM10971 | BAC aCGH | Probe signal intensity | 56 |
| nssv549295 | copy number loss | GM10976 | BAC aCGH | Probe signal intensity | 56 |
| nssv549296 | copy number loss | GM10979 | BAC aCGH | Probe signal intensity | 65 |
| nssv549297 | copy number loss | GM11323 | BAC aCGH | Probe signal intensity | 53 |
| nssv549298 | copy number loss | GM11521 | BAC aCGH | Probe signal intensity | 49 |
| nssv549299 | copy number loss | GM11523 | BAC aCGH | Probe signal intensity | 54 |
| nssv549300 | copy number loss | GM16689 | BAC aCGH | Probe signal intensity | 42 |
| nssv549301 | copy number loss | GM17015 | BAC aCGH | Probe signal intensity | 60 |
| nssv549302 | copy number loss | GM17051 | BAC aCGH | Probe signal intensity | 54 |
| nssv549303 | copy number loss | GM17052 | BAC aCGH | Probe signal intensity | 50 |
| nssv549304 | copy number loss | GM17058 | BAC aCGH | Probe signal intensity | 54 |
| nssv549305 | copy number loss | JK1058B | BAC aCGH | Probe signal intensity | 61 |
| nssv549306 | copy number loss | JK1061 | BAC aCGH | Probe signal intensity | 51 |
| nssv549307 | copy number loss | JK1688B | BAC aCGH | Probe signal intensity | 53 |
| nssv549308 | copy number loss | JK776 | BAC aCGH | Probe signal intensity | 50 |
| nssv549309 | copy number loss | P86GA | BAC aCGH | Probe signal intensity | 50 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv549285 | Remapped | Perfect | NC_000004.12:g.(?_ 69250956)_(6941006 9_?)del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 69,250,956 | 69,410,069 |
| nssv549286 | Remapped | Perfect | NC_000004.12:g.(?_ 69250956)_(6941006 9_?)del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 69,250,956 | 69,410,069 |
| nssv549287 | Remapped | Perfect | NC_000004.12:g.(?_ 69250956)_(6941006 9_?)del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 69,250,956 | 69,410,069 |
| nssv549288 | Remapped | Perfect | NC_000004.12:g.(?_ 69250956)_(6941006 9_?)del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 69,250,956 | 69,410,069 |
| nssv549289 | Remapped | Perfect | NC_000004.12:g.(?_ 69250956)_(6941006 9_?)del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 69,250,956 | 69,410,069 |
| nssv549290 | Remapped | Perfect | NC_000004.12:g.(?_ 69250956)_(6941006 9_?)del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 69,250,956 | 69,410,069 |
| nssv549291 | Remapped | Perfect | NC_000004.12:g.(?_ 69250956)_(6941006 9_?)del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 69,250,956 | 69,410,069 |
| nssv549292 | Remapped | Perfect | NC_000004.12:g.(?_ 69250956)_(6941006 9_?)del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 69,250,956 | 69,410,069 |
| nssv549293 | Remapped | Perfect | NC_000004.12:g.(?_ 69250956)_(6941006 9_?)del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 69,250,956 | 69,410,069 |
| nssv549294 | Remapped | Perfect | NC_000004.12:g.(?_ 69250956)_(6941006 9_?)del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 69,250,956 | 69,410,069 |
| nssv549295 | Remapped | Perfect | NC_000004.12:g.(?_ 69250956)_(6941006 9_?)del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 69,250,956 | 69,410,069 |
| nssv549296 | Remapped | Perfect | NC_000004.12:g.(?_ 69250956)_(6941006 9_?)del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 69,250,956 | 69,410,069 |
| nssv549297 | Remapped | Perfect | NC_000004.12:g.(?_ 69250956)_(6941006 9_?)del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 69,250,956 | 69,410,069 |
| nssv549298 | Remapped | Perfect | NC_000004.12:g.(?_ 69250956)_(6941006 9_?)del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 69,250,956 | 69,410,069 |
| nssv549299 | Remapped | Perfect | NC_000004.12:g.(?_ 69250956)_(6941006 9_?)del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 69,250,956 | 69,410,069 |
| nssv549300 | Remapped | Perfect | NC_000004.12:g.(?_ 69250956)_(6941006 9_?)del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 69,250,956 | 69,410,069 |
| nssv549301 | Remapped | Perfect | NC_000004.12:g.(?_ 69250956)_(6941006 9_?)del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 69,250,956 | 69,410,069 |
| nssv549302 | Remapped | Perfect | NC_000004.12:g.(?_ 69250956)_(6941006 9_?)del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 69,250,956 | 69,410,069 |
| nssv549303 | Remapped | Perfect | NC_000004.12:g.(?_ 69250956)_(6941006 9_?)del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 69,250,956 | 69,410,069 |
| nssv549304 | Remapped | Perfect | NC_000004.12:g.(?_ 69250956)_(6941006 9_?)del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 69,250,956 | 69,410,069 |
| nssv549305 | Remapped | Perfect | NC_000004.12:g.(?_ 69250956)_(6941006 9_?)del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 69,250,956 | 69,410,069 |
| nssv549306 | Remapped | Perfect | NC_000004.12:g.(?_ 69250956)_(6941006 9_?)del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 69,250,956 | 69,410,069 |
| nssv549307 | Remapped | Perfect | NC_000004.12:g.(?_ 69250956)_(6941006 9_?)del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 69,250,956 | 69,410,069 |
| nssv549308 | Remapped | Perfect | NC_000004.12:g.(?_ 69250956)_(6941006 9_?)del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 69,250,956 | 69,410,069 |
| nssv549309 | Remapped | Perfect | NC_000004.12:g.(?_ 69250956)_(6941006 9_?)del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 69,250,956 | 69,410,069 |
| nssv549285 | Remapped | Perfect | NC_000004.11:g.(?_ 70116674)_(7027578 7_?)del | GRCh37.p13 | First Pass | NC_000004.11 | Chr4 | 70,116,674 | 70,275,787 |
| nssv549286 | Remapped | Perfect | NC_000004.11:g.(?_ 70116674)_(7027578 7_?)del | GRCh37.p13 | First Pass | NC_000004.11 | Chr4 | 70,116,674 | 70,275,787 |
| nssv549287 | Remapped | Perfect | NC_000004.11:g.(?_ 70116674)_(7027578 7_?)del | GRCh37.p13 | First Pass | NC_000004.11 | Chr4 | 70,116,674 | 70,275,787 |
| nssv549288 | Remapped | Perfect | NC_000004.11:g.(?_ 70116674)_(7027578 7_?)del | GRCh37.p13 | First Pass | NC_000004.11 | Chr4 | 70,116,674 | 70,275,787 |
| nssv549289 | Remapped | Perfect | NC_000004.11:g.(?_ 70116674)_(7027578 7_?)del | GRCh37.p13 | First Pass | NC_000004.11 | Chr4 | 70,116,674 | 70,275,787 |
| nssv549290 | Remapped | Perfect | NC_000004.11:g.(?_ 70116674)_(7027578 7_?)del | GRCh37.p13 | First Pass | NC_000004.11 | Chr4 | 70,116,674 | 70,275,787 |
| nssv549291 | Remapped | Perfect | NC_000004.11:g.(?_ 70116674)_(7027578 7_?)del | GRCh37.p13 | First Pass | NC_000004.11 | Chr4 | 70,116,674 | 70,275,787 |
| nssv549292 | Remapped | Perfect | NC_000004.11:g.(?_ 70116674)_(7027578 7_?)del | GRCh37.p13 | First Pass | NC_000004.11 | Chr4 | 70,116,674 | 70,275,787 |
| nssv549293 | Remapped | Perfect | NC_000004.11:g.(?_ 70116674)_(7027578 7_?)del | GRCh37.p13 | First Pass | NC_000004.11 | Chr4 | 70,116,674 | 70,275,787 |
| nssv549294 | Remapped | Perfect | NC_000004.11:g.(?_ 70116674)_(7027578 7_?)del | GRCh37.p13 | First Pass | NC_000004.11 | Chr4 | 70,116,674 | 70,275,787 |
| nssv549295 | Remapped | Perfect | NC_000004.11:g.(?_ 70116674)_(7027578 7_?)del | GRCh37.p13 | First Pass | NC_000004.11 | Chr4 | 70,116,674 | 70,275,787 |
| nssv549296 | Remapped | Perfect | NC_000004.11:g.(?_ 70116674)_(7027578 7_?)del | GRCh37.p13 | First Pass | NC_000004.11 | Chr4 | 70,116,674 | 70,275,787 |
| nssv549297 | Remapped | Perfect | NC_000004.11:g.(?_ 70116674)_(7027578 7_?)del | GRCh37.p13 | First Pass | NC_000004.11 | Chr4 | 70,116,674 | 70,275,787 |
| nssv549298 | Remapped | Perfect | NC_000004.11:g.(?_ 70116674)_(7027578 7_?)del | GRCh37.p13 | First Pass | NC_000004.11 | Chr4 | 70,116,674 | 70,275,787 |
| nssv549299 | Remapped | Perfect | NC_000004.11:g.(?_ 70116674)_(7027578 7_?)del | GRCh37.p13 | First Pass | NC_000004.11 | Chr4 | 70,116,674 | 70,275,787 |
| nssv549300 | Remapped | Perfect | NC_000004.11:g.(?_ 70116674)_(7027578 7_?)del | GRCh37.p13 | First Pass | NC_000004.11 | Chr4 | 70,116,674 | 70,275,787 |
| nssv549301 | Remapped | Perfect | NC_000004.11:g.(?_ 70116674)_(7027578 7_?)del | GRCh37.p13 | First Pass | NC_000004.11 | Chr4 | 70,116,674 | 70,275,787 |
| nssv549302 | Remapped | Perfect | NC_000004.11:g.(?_ 70116674)_(7027578 7_?)del | GRCh37.p13 | First Pass | NC_000004.11 | Chr4 | 70,116,674 | 70,275,787 |
| nssv549303 | Remapped | Perfect | NC_000004.11:g.(?_ 70116674)_(7027578 7_?)del | GRCh37.p13 | First Pass | NC_000004.11 | Chr4 | 70,116,674 | 70,275,787 |
| nssv549304 | Remapped | Perfect | NC_000004.11:g.(?_ 70116674)_(7027578 7_?)del | GRCh37.p13 | First Pass | NC_000004.11 | Chr4 | 70,116,674 | 70,275,787 |
| nssv549305 | Remapped | Perfect | NC_000004.11:g.(?_ 70116674)_(7027578 7_?)del | GRCh37.p13 | First Pass | NC_000004.11 | Chr4 | 70,116,674 | 70,275,787 |
| nssv549306 | Remapped | Perfect | NC_000004.11:g.(?_ 70116674)_(7027578 7_?)del | GRCh37.p13 | First Pass | NC_000004.11 | Chr4 | 70,116,674 | 70,275,787 |
| nssv549307 | Remapped | Perfect | NC_000004.11:g.(?_ 70116674)_(7027578 7_?)del | GRCh37.p13 | First Pass | NC_000004.11 | Chr4 | 70,116,674 | 70,275,787 |
| nssv549308 | Remapped | Perfect | NC_000004.11:g.(?_ 70116674)_(7027578 7_?)del | GRCh37.p13 | First Pass | NC_000004.11 | Chr4 | 70,116,674 | 70,275,787 |
| nssv549309 | Remapped | Perfect | NC_000004.11:g.(?_ 70116674)_(7027578 7_?)del | GRCh37.p13 | First Pass | NC_000004.11 | Chr4 | 70,116,674 | 70,275,787 |
| nssv549285 | Submitted genomic | NC_000004.8:g.(?_7 0432219)_(70591332 _?)del | NCBI34 (hg16) | NC_000004.8 | Chr4 | 70,432,219 | 70,591,332 | ||
| nssv549286 | Submitted genomic | NC_000004.8:g.(?_7 0432219)_(70591332 _?)del | NCBI34 (hg16) | NC_000004.8 | Chr4 | 70,432,219 | 70,591,332 | ||
| nssv549287 | Submitted genomic | NC_000004.8:g.(?_7 0432219)_(70591332 _?)del | NCBI34 (hg16) | NC_000004.8 | Chr4 | 70,432,219 | 70,591,332 | ||
| nssv549288 | Submitted genomic | NC_000004.8:g.(?_7 0432219)_(70591332 _?)del | NCBI34 (hg16) | NC_000004.8 | Chr4 | 70,432,219 | 70,591,332 | ||
| nssv549289 | Submitted genomic | NC_000004.8:g.(?_7 0432219)_(70591332 _?)del | NCBI34 (hg16) | NC_000004.8 | Chr4 | 70,432,219 | 70,591,332 | ||
| nssv549290 | Submitted genomic | NC_000004.8:g.(?_7 0432219)_(70591332 _?)del | NCBI34 (hg16) | NC_000004.8 | Chr4 | 70,432,219 | 70,591,332 | ||
| nssv549291 | Submitted genomic | NC_000004.8:g.(?_7 0432219)_(70591332 _?)del | NCBI34 (hg16) | NC_000004.8 | Chr4 | 70,432,219 | 70,591,332 | ||
| nssv549292 | Submitted genomic | NC_000004.8:g.(?_7 0432219)_(70591332 _?)del | NCBI34 (hg16) | NC_000004.8 | Chr4 | 70,432,219 | 70,591,332 | ||
| nssv549293 | Submitted genomic | NC_000004.8:g.(?_7 0432219)_(70591332 _?)del | NCBI34 (hg16) | NC_000004.8 | Chr4 | 70,432,219 | 70,591,332 | ||
| nssv549294 | Submitted genomic | NC_000004.8:g.(?_7 0432219)_(70591332 _?)del | NCBI34 (hg16) | NC_000004.8 | Chr4 | 70,432,219 | 70,591,332 | ||
| nssv549295 | Submitted genomic | NC_000004.8:g.(?_7 0432219)_(70591332 _?)del | NCBI34 (hg16) | NC_000004.8 | Chr4 | 70,432,219 | 70,591,332 | ||
| nssv549296 | Submitted genomic | NC_000004.8:g.(?_7 0432219)_(70591332 _?)del | NCBI34 (hg16) | NC_000004.8 | Chr4 | 70,432,219 | 70,591,332 | ||
| nssv549297 | Submitted genomic | NC_000004.8:g.(?_7 0432219)_(70591332 _?)del | NCBI34 (hg16) | NC_000004.8 | Chr4 | 70,432,219 | 70,591,332 | ||
| nssv549298 | Submitted genomic | NC_000004.8:g.(?_7 0432219)_(70591332 _?)del | NCBI34 (hg16) | NC_000004.8 | Chr4 | 70,432,219 | 70,591,332 | ||
| nssv549299 | Submitted genomic | NC_000004.8:g.(?_7 0432219)_(70591332 _?)del | NCBI34 (hg16) | NC_000004.8 | Chr4 | 70,432,219 | 70,591,332 | ||
| nssv549300 | Submitted genomic | NC_000004.8:g.(?_7 0432219)_(70591332 _?)del | NCBI34 (hg16) | NC_000004.8 | Chr4 | 70,432,219 | 70,591,332 | ||
| nssv549301 | Submitted genomic | NC_000004.8:g.(?_7 0432219)_(70591332 _?)del | NCBI34 (hg16) | NC_000004.8 | Chr4 | 70,432,219 | 70,591,332 | ||
| nssv549302 | Submitted genomic | NC_000004.8:g.(?_7 0432219)_(70591332 _?)del | NCBI34 (hg16) | NC_000004.8 | Chr4 | 70,432,219 | 70,591,332 | ||
| nssv549303 | Submitted genomic | NC_000004.8:g.(?_7 0432219)_(70591332 _?)del | NCBI34 (hg16) | NC_000004.8 | Chr4 | 70,432,219 | 70,591,332 | ||
| nssv549304 | Submitted genomic | NC_000004.8:g.(?_7 0432219)_(70591332 _?)del | NCBI34 (hg16) | NC_000004.8 | Chr4 | 70,432,219 | 70,591,332 | ||
| nssv549305 | Submitted genomic | NC_000004.8:g.(?_7 0432219)_(70591332 _?)del | NCBI34 (hg16) | NC_000004.8 | Chr4 | 70,432,219 | 70,591,332 | ||
| nssv549306 | Submitted genomic | NC_000004.8:g.(?_7 0432219)_(70591332 _?)del | NCBI34 (hg16) | NC_000004.8 | Chr4 | 70,432,219 | 70,591,332 | ||
| nssv549307 | Submitted genomic | NC_000004.8:g.(?_7 0432219)_(70591332 _?)del | NCBI34 (hg16) | NC_000004.8 | Chr4 | 70,432,219 | 70,591,332 | ||
| nssv549308 | Submitted genomic | NC_000004.8:g.(?_7 0432219)_(70591332 _?)del | NCBI34 (hg16) | NC_000004.8 | Chr4 | 70,432,219 | 70,591,332 | ||
| nssv549309 | Submitted genomic | NC_000004.8:g.(?_7 0432219)_(70591332 _?)del | NCBI34 (hg16) | NC_000004.8 | Chr4 | 70,432,219 | 70,591,332 |