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dbVar

Database of genomic structural variation

nsv470974

Organism: Homo sapiens

Study:nstd30 (Jakobsson et al. 2008)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:NCBI36 (hg18)

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:77,157

Description:Single-copy duplication
Publication(s):Jakobsson et al. 2008

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 730 SVs from 86 studies. See in: genome view

Remapped(Score: Perfect):131,049,527-131,126,683

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv470974	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000010.11	Chr10	131,049,527	131,126,683
nsv470974	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000010.10	Chr10	132,847,790	132,924,946
nsv470974	Submitted genomic		NCBI36 (hg18)	Primary Assembly		NC_000010.9	Chr10	132,737,780	132,814,936

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Copy number	Other Calls in this Sample and Study
nssv545006	copy number gain	HGDP00448	SNP array	SNP genotyping analysis	3	5
nssv545007	copy number gain	HGDP00479	SNP array	SNP genotyping analysis	3	9

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv545006	Remapped	Perfect	NC_000010.11:g.(?_ 131049527)_(131126 683_?)dup	GRCh38.p12	First Pass	NC_000010.11	Chr10	131,049,527	131,126,683
nssv545007	Remapped	Perfect	NC_000010.11:g.(?_ 131060995)_(131126 683_?)dup	GRCh38.p12	First Pass	NC_000010.11	Chr10	131,060,995	131,126,683
nssv545006	Remapped	Perfect	NC_000010.10:g.(?_ 132847790)_(132924 946_?)dup	GRCh37.p13	First Pass	NC_000010.10	Chr10	132,847,790	132,924,946
nssv545007	Remapped	Perfect	NC_000010.10:g.(?_ 132859258)_(132924 946_?)dup	GRCh37.p13	First Pass	NC_000010.10	Chr10	132,859,258	132,924,946
nssv545006	Submitted genomic		NC_000010.9:g.(?_1 32737780)_(1328149 36_?)dup	NCBI36 (hg18)		NC_000010.9	Chr10	132,737,780	132,814,936
nssv545007	Submitted genomic		NC_000010.9:g.(?_1 32749248)_(1328149 36_?)dup	NCBI36 (hg18)		NC_000010.9	Chr10	132,749,248	132,814,936

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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