nsv4675525
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:440,646
- Description:GRCh37/hg19 7q21.11(chr7:80303798-80744443)x1 AND not provided
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1337 SVs from 78 studies. See in: genome view
Overlapping variant regions from other studies: 1337 SVs from 78 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4675525 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000007.14 | Chr7 | 80,674,482 | 81,115,127 |
| nsv4675525 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000007.13 | Chr7 | 80,303,798 | 80,744,443 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv16208841 | copy number loss | Multiple | Multiple | not provided | Uncertain significance | ClinVar | RCV001005978.1, VCV000815001.1 | 1 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv16208841 | Remapped | Perfect | NC_000007.14:g.(?_ 80674482)_(8111512 7_?)del | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 80,674,482 | 81,115,127 |
| nssv16208841 | Submitted genomic | NC_000007.13:g.(?_ 80303798)_(8074444 3_?)del | GRCh37 (hg19) | NC_000007.13 | Chr7 | 80,303,798 | 80,744,443 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv16208841 | GRCh37: NC_000007.13:g.(?_80303798)_(80744443_?)del | copy number loss | germline | not provided | Uncertain significance | ClinVar | RCV001005978.1, VCV000815001.1 | 1 |