nsv4675388
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:809,707
- Description:GRCh37/hg19 12q24.22-24.23(chr12:117858408-118668114)x4 AND not provided
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 2239 SVs from 79 studies. See in: genome view
Overlapping variant regions from other studies: 2239 SVs from 79 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4675388 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000012.12 | Chr12 | 117,420,603 | 118,230,309 |
| nsv4675388 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000012.11 | Chr12 | 117,858,408 | 118,668,114 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv16207157 | copy number gain | Multiple | Multiple | not provided | Uncertain significance | ClinVar | RCV001006538.1, VCV000815561.1 | 4 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv16207157 | Remapped | Perfect | NC_000012.12:g.(?_ 117420603)_(118230 309_?)dup | GRCh38.p12 | First Pass | NC_000012.12 | Chr12 | 117,420,603 | 118,230,309 |
| nssv16207157 | Submitted genomic | NC_000012.11:g.(?_ 117858408)_(118668 114_?)dup | GRCh37 (hg19) | NC_000012.11 | Chr12 | 117,858,408 | 118,668,114 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv16207157 | GRCh37: NC_000012.11:g.(?_117858408)_(118668114_?)dup | copy number gain | germline | not provided | Uncertain significance | ClinVar | RCV001006538.1, VCV000815561.1 | 4 |