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dbVar

Database of genomic structural variation

nsv4675201

Organism: Homo sapiens

Study:nstd102 (Clinical Structural Variants)
Variant Type:copy number variation
Method Type:Multiple
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: Yes
Region Size:4,510,511

Description:GRCh37/hg19 16q21-22.1(chr16:65669673-70180183)x1 AND not provided

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 11719 SVs from 119 studies. See in: genome view

Remapped(Score: Perfect):65,635,770-70,146,280

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv4675201	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000016.10	Chr16	65,635,770	70,146,280
nsv4675201	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000016.9	Chr16	65,669,673	70,180,183

Variant Call Information

Variant Call ID	Type	Method	Analysis	Subject Phenotype	Clinical Interpretation	Source of Interpretation	ClinVar ID	Copy number
nssv16208465	copy number loss	Multiple	Multiple	not provided	Pathogenic	ClinVar	RCV001006797.1, VCV000815823.1	1

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv16208465	Remapped	Perfect	NC_000016.10:g.(?_ 65635770)_(7014628 0_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	65,635,770	70,146,280
nssv16208465	Submitted genomic		NC_000016.9:g.(?_6 5669673)_(70180183 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	65,669,673	70,180,183

No validation data were submitted for this variant

Clinical Assertions

Variant Call ID	HGVS	Type	Allele Origin	Subject Phenotype	Clinical Interpretation	Source of Interpretation	ClinVar ID	Copy number
nssv16208465	GRCh37: NC_000016.9:g.(?_65669673)_(70180183_?)del	copy number loss	germline	not provided	Pathogenic	ClinVar	RCV001006797.1, VCV000815823.1	1

No genotype data were submitted for this variant

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