nsv4674822
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:9,262,319
- Description:GRCh37/hg19 7p15.3-14.3(chr7:23877135-33139446)x1 AND not provided
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 23745 SVs from 119 studies. See in: genome view
Overlapping variant regions from other studies: 23748 SVs from 119 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4674822 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000007.14 | Chr7 | 23,837,516 | 33,099,834 |
| nsv4674822 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000007.13 | Chr7 | 23,877,135 | 33,139,446 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv16208120 | copy number loss | Multiple | Multiple | not provided | Pathogenic | ClinVar | RCV001005924.1, VCV000814947.1 | 1 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv16208120 | Remapped | Perfect | NC_000007.14:g.(?_ 23837516)_(3309983 4_?)del | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 23,837,516 | 33,099,834 |
| nssv16208120 | Submitted genomic | NC_000007.13:g.(?_ 23877135)_(3313944 6_?)del | GRCh37 (hg19) | NC_000007.13 | Chr7 | 23,877,135 | 33,139,446 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv16208120 | GRCh37: NC_000007.13:g.(?_23877135)_(33139446_?)del | copy number loss | germline | not provided | Pathogenic | ClinVar | RCV001005924.1, VCV000814947.1 | 1 |