nsv4674816
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:392,487
- Description:GRCh37/hg19 1q32.1(chr1:204954317-205346803)x1 AND not provided
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1093 SVs from 73 studies. See in: genome view
Overlapping variant regions from other studies: 1093 SVs from 73 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4674816 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000001.11 | Chr1 | 204,985,189 | 205,377,675 |
| nsv4674816 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000001.10 | Chr1 | 204,954,317 | 205,346,803 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv16207754 | copy number loss | Multiple | Multiple | not provided | Uncertain significance | ClinVar | RCV001005168.1, VCV000814156.1 | 1 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv16207754 | Remapped | Perfect | NC_000001.11:g.(?_ 204985189)_(205377 675_?)del | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 204,985,189 | 205,377,675 |
| nssv16207754 | Submitted genomic | NC_000001.10:g.(?_ 204954317)_(205346 803_?)del | GRCh37 (hg19) | NC_000001.10 | Chr1 | 204,954,317 | 205,346,803 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv16207754 | GRCh37: NC_000001.10:g.(?_204954317)_(205346803_?)del | copy number loss | germline | not provided | Uncertain significance | ClinVar | RCV001005168.1, VCV000814156.1 | 1 |