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dbVar

Database of genomic structural variation

nsv4635968

Organism: Homo sapiens

Study:nstd186 (NCBI Curated Common Structural Variants)
Variant Type:mobile element deletion
Method Type:Curated
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:326

Description:esv3872172 from 1000 Genomes Consortium Phase 3 Integrated SV. For a full list of variants now included in nstd186, refer to the mapping file provided here.

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 119 SVs from 52 studies. See in: genome view

Remapped(Score: Perfect):21,067,973-21,068,298

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv4635968	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000014.9	Chr14	21,067,973	21,068,298
nsv4635968	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000014.8	Chr14	21,536,132	21,536,457

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv16195976	alu deletion	Curated	Curated

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv16195976	Remapped	Perfect	NC_000014.9:g.2106 7973_21068298del	GRCh38.p12	First Pass	NC_000014.9	Chr14	21,067,973	21,068,298
nssv16195976	Submitted genomic		NC_000014.8:g.2153 6132_21536457del	GRCh37 (hg19)		NC_000014.8	Chr14	21,536,132	21,536,457

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv16195976	0.515	2578	5008

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