nsv4457826
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:401,432
- Description:GRCh37/hg19 19p13.11(chr19:19560981-19962412)x3 AND not provided
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1449 SVs from 85 studies. See in: genome view
Overlapping variant regions from other studies: 1446 SVs from 85 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4457826 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000019.10 | Chr19 | 19,450,172 | 19,851,603 |
| nsv4457826 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000019.9 | Chr19 | 19,560,981 | 19,962,412 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv15776568 | copy number gain | Multiple | Multiple | not provided | Uncertain significance | ClinVar | RCV000849580.2, VCV000688889.2 | 3 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv15776568 | Remapped | Perfect | NC_000019.10:g.(?_ 19450172)_(1985160 3_?)dup | GRCh38.p12 | First Pass | NC_000019.10 | Chr19 | 19,450,172 | 19,851,603 |
| nssv15776568 | Submitted genomic | NC_000019.9:g.(?_1 9560981)_(19962412 _?)dup | GRCh37 (hg19) | NC_000019.9 | Chr19 | 19,560,981 | 19,962,412 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv15776568 | GRCh37: NC_000019.9:g.(?_19560981)_(19962412_?)dup | copy number gain | unknown | not provided | Uncertain significance | ClinVar | RCV000849580.2, VCV000688889.2 | 3 |