nsv4457159
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:2,536,371
- Description:GRCh37/hg19 8p21.3-21.2(chr8:21662847-24199218)x1 AND not provided
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 6969 SVs from 103 studies. See in: genome view
Overlapping variant regions from other studies: 6969 SVs from 103 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4457159 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000008.11 | Chr8 | 21,805,335 | 24,341,705 |
| nsv4457159 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000008.10 | Chr8 | 21,662,847 | 24,199,218 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv15773207 | copy number loss | Multiple | Multiple | not provided | Pathogenic | ClinVar | RCV000849161.2, VCV000688470.2 | 1 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv15773207 | Remapped | Perfect | NC_000008.11:g.(?_ 21805335)_(2434170 5_?)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 21,805,335 | 24,341,705 |
| nssv15773207 | Submitted genomic | NC_000008.10:g.(?_ 21662847)_(2419921 8_?)del | GRCh37 (hg19) | NC_000008.10 | Chr8 | 21,662,847 | 24,199,218 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv15773207 | GRCh37: NC_000008.10:g.(?_21662847)_(24199218_?)del | copy number loss | unknown | not provided | Pathogenic | ClinVar | RCV000849161.2, VCV000688470.2 | 1 |