nsv4453540
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:190,740
- Description:GRCh37/hg19 2q36.3(chr2:230573487-230764226)x3 AND not provided
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 536 SVs from 51 studies. See in: genome view
Overlapping variant regions from other studies: 536 SVs from 51 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4453540 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000002.12 | Chr2 | 229,708,771 | 229,899,510 |
| nsv4453540 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000002.11 | Chr2 | 230,573,487 | 230,764,226 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv15772689 | copy number gain | Multiple | Multiple | not provided | Uncertain significance | ClinVar | RCV000848152.2, VCV000687453.2 | 3 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv15772689 | Remapped | Perfect | NC_000002.12:g.(?_ 229708771)_(229899 510_?)dup | GRCh38.p12 | First Pass | NC_000002.12 | Chr2 | 229,708,771 | 229,899,510 |
| nssv15772689 | Submitted genomic | NC_000002.11:g.(?_ 230573487)_(230764 226_?)dup | GRCh37 (hg19) | NC_000002.11 | Chr2 | 230,573,487 | 230,764,226 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv15772689 | GRCh37: NC_000002.11:g.(?_230573487)_(230764226_?)dup | copy number gain | unknown | not provided | Uncertain significance | ClinVar | RCV000848152.2, VCV000687453.2 | 3 |