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nsv4412262

  • Variant Calls:1
  • Validation:Not tested
  • Clinical Assertions: No
  • Region Size:86,629

    Links to Other Resources

    Source: NCBI

    Genome View

    Select assembly:
    Overlapping variant regions from other studies: 1846 SVs from 107 studies. See in: genome view    
    Remapped(Score: Perfect):195,669,246-195,755,499Question Mark
    Overlapping variant regions from other studies: 1084 SVs from 75 studies. See in: genome view    
    Remapped(Score: Good):39,237-123,716Question Mark
    Overlapping variant regions from other studies: 1091 SVs from 76 studies. See in: genome view    
    Remapped(Score: Good):39,237-124,428Question Mark
    Overlapping variant regions from other studies: 1089 SVs from 76 studies. See in: genome view    
    Remapped(Score: Good):39,237-125,865Question Mark
    Overlapping variant regions from other studies: 1141 SVs from 78 studies. See in: genome view    
    Remapped(Score: Perfect):39,743-125,996Question Mark
    Overlapping variant regions from other studies: 1118 SVs from 76 studies. See in: genome view    
    Remapped(Score: Good):40,552-126,798Question Mark
    Overlapping variant regions from other studies: 1073 SVs from 75 studies. See in: genome view    
    Remapped(Score: Good):39,237-123,154Question Mark
    Overlapping variant regions from other studies: 1143 SVs from 78 studies. See in: genome view    
    Remapped(Score: Perfect):39,743-125,996Question Mark
    Overlapping variant regions from other studies: 1850 SVs from 108 studies. See in: genome view    
    Submitted genomic195,396,117-195,482,370Question Mark

    Variant Region Placement Information

    Variant Region IDPlacement TypeScoreAssemblyAssembly UnitReciprocitySequence IDChrOuter StartInner StartInner StopOuter Stop
    nsv4412262RemappedPerfectGRCh38.p12Primary AssemblyFirst PassNC_000003.12Chr3195,669,246195,681,643195,751,553195,755,499
    nsv4412262RemappedGoodGRCh38.p12ALT_REF_LOCI_4Second PassNT_187688.1Chr3|NT_18
    7688.1    		39,23739,237123,716123,716
    nsv4412262RemappedGoodGRCh38.p12ALT_REF_LOCI_6Second PassNT_187690.1Chr3|NT_18
    7690.1    		39,23739,237124,428124,428
    nsv4412262RemappedGoodGRCh38.p12ALT_REF_LOCI_7Second PassNT_187691.1Chr3|NT_18
    7691.1    		39,23739,237125,865125,865
    nsv4412262RemappedPerfectGRCh38.p12ALT_REF_LOCI_5Second PassNT_187689.1Chr3|NT_18
    7689.1    		39,74352,140122,050125,996
    nsv4412262RemappedGoodGRCh38.p12ALT_REF_LOCI_3Second PassNT_187678.1Chr3|NT_18
    7678.1    		40,55240,552126,798126,798
    nsv4412262RemappedGoodGRCh38.p12ALT_REF_LOCI_2Second PassNT_187649.1Chr3|NT_18
    7649.1    		39,23739,237123,154123,154
    nsv4412262RemappedPerfectGRCh38.p12ALT_REF_LOCI_1Second PassNT_187532.1Chr3|NT_18
    7532.1    		39,74352,140122,050125,996
    nsv4412262Submitted genomicGRCh37 (hg19)Primary AssemblyNC_000003.11Chr3195,396,117195,408,514195,478,424195,482,370

    Variant Call Information

    Variant Call IDTypeMethodAnalysis
    nssv15733495copy number lossMultipleMultiple

    Variant Call Placement Information

    Variant Call IDPlacement TypeScoreHGVSAssemblyReciprocitySequence IDChrOuter StartInner StartInner StopOuter Stop
    nssv15733495RemappedGoodNT_187688.1:g.(392
    37_39237)_(123716_
    123716)del    		GRCh38.p12Second PassNT_187688.1Chr3|NT_18
    7688.1    		39,23739,237123,716123,716
    nssv15733495RemappedGoodNT_187690.1:g.(392
    37_39237)_(124428_
    124428)del    		GRCh38.p12Second PassNT_187690.1Chr3|NT_18
    7690.1    		39,23739,237124,428124,428
    nssv15733495RemappedGoodNT_187691.1:g.(392
    37_39237)_(125865_
    125865)del    		GRCh38.p12Second PassNT_187691.1Chr3|NT_18
    7691.1    		39,23739,237125,865125,865
    nssv15733495RemappedPerfectNT_187689.1:g.(397
    43_52140)_(122050_
    125996)del    		GRCh38.p12Second PassNT_187689.1Chr3|NT_18
    7689.1    		39,74352,140122,050125,996
    nssv15733495RemappedGoodNT_187678.1:g.(405
    52_40552)_(126798_
    126798)del    		GRCh38.p12Second PassNT_187678.1Chr3|NT_18
    7678.1    		40,55240,552126,798126,798
    nssv15733495RemappedGoodNT_187649.1:g.(392
    37_39237)_(123154_
    123154)del    		GRCh38.p12Second PassNT_187649.1Chr3|NT_18
    7649.1    		39,23739,237123,154123,154
    nssv15733495RemappedPerfectNT_187532.1:g.(397
    43_52140)_(122050_
    125996)del    		GRCh38.p12Second PassNT_187532.1Chr3|NT_18
    7532.1    		39,74352,140122,050125,996
    nssv15733495RemappedPerfectNC_000003.12:g.(19
    5669246_195681643)
    _(195751553_195755
    499)del    		GRCh38.p12First PassNC_000003.12Chr3195,669,246195,681,643195,751,553195,755,499
    nssv15733495Submitted genomicNC_000003.11:g.(19
    5396117_195408514)
    _(195478424_195482
    370)del    		GRCh37 (hg19)NC_000003.11Chr3195,396,117195,408,514195,478,424195,482,370

    No validation data were submitted for this variant

    No clinical assertion data were submitted for this variant

    No genotype data were submitted for this variant

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