nsv4385858
- Organism: Homo sapiens
- Study:nstd173 (Zarrei et al. 2019)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:20,813,391
- Publication(s):Zarrei et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 47704 SVs from 133 studies. See in: genome view
Overlapping variant regions from other studies: 47552 SVs from 133 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4385858 | Remapped | Pass | GRCh38.p12 | Primary Assembly | First Pass | NC_000018.10 | Chr18 | 136,227 | 20,949,617 |
| nsv4385858 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000018.9 | Chr18 | 136,227 | 18,529,578 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv15615225 | copy number loss | 1-0755-003 | SNP array | Genotyping | 20 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv15615225 | Remapped | Pass | NC_000018.10:g.(?_ 136227)_(20949617_ ?)del | GRCh38.p12 | First Pass | NC_000018.10 | Chr18 | 136,227 | 20,949,617 |
| nssv15615225 | Submitted genomic | NC_000018.9:g.(?_1 36227)_(18529578_? )del | GRCh37 (hg19) | NC_000018.9 | Chr18 | 136,227 | 18,529,578 |