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dbVar

Database of genomic structural variation

nsv4382344

Organism: Homo sapiens

Study:nstd173 (Zarrei et al. 2019)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:145,342

Publication(s):Zarrei et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 556 SVs from 58 studies. See in: genome view

Remapped(Score: Perfect):34,774,140-34,919,481

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv4382344	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000006.12	Chr6	34,774,140	34,919,481
nsv4382344	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000006.11	Chr6	34,741,917	34,887,258

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv15627748	copy number gain	1-0534-003	SNP array	Genotyping	16
nssv15628083	copy number gain	1-0534-004	SNP array	Genotyping	22

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15627748	Remapped	Perfect	NC_000006.12:g.(?_ 34774140)_(3491948 1_?)dup	GRCh38.p12	First Pass	NC_000006.12	Chr6	34,774,140	34,919,481
nssv15628083	Remapped	Perfect	NC_000006.12:g.(?_ 34774140)_(3491948 1_?)dup	GRCh38.p12	First Pass	NC_000006.12	Chr6	34,774,140	34,919,481
nssv15627748	Submitted genomic		NC_000006.11:g.(?_ 34741917)_(3488725 8_?)dup	GRCh37 (hg19)		NC_000006.11	Chr6	34,741,917	34,887,258
nssv15628083	Submitted genomic		NC_000006.11:g.(?_ 34741917)_(3488725 8_?)dup	GRCh37 (hg19)		NC_000006.11	Chr6	34,741,917	34,887,258

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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