nsv433046
- Organism: Homo sapiens
- Study:nstd12 (Marshall et al. 2008)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI35 (hg17)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:92,622
- Publication(s):Marshall et al. 2008
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1160 SVs from 99 studies. See in: genome view
Overlapping variant regions from other studies: 1160 SVs from 99 studies. See in: genome view
Overlapping variant regions from other studies: 26 SVs from 11 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv433046 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000007.14 | Chr7 | 38,219,753 | 38,312,374 |
| nsv433046 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000007.13 | Chr7 | 38,259,354 | 38,351,975 |
| nsv433046 | Submitted genomic | NCBI35 (hg17) | Primary Assembly | NC_000007.11 | Chr7 | 38,032,594 | 38,125,215 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv559867 | copy number loss | 72817 | SNP array | SNP genotyping analysis | 9 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv559867 | Remapped | Perfect | NC_000007.14:g.(?_ 38219753)_(3831237 4_?)del | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 38,219,753 | 38,312,374 |
| nssv559867 | Remapped | Perfect | NC_000007.13:g.(?_ 38259354)_(3835197 5_?)del | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 38,259,354 | 38,351,975 |
| nssv559867 | Submitted genomic | NC_000007.11:g.(?_ 38032594)_(3812521 5_?)del | NCBI35 (hg17) | NC_000007.11 | Chr7 | 38,032,594 | 38,125,215 |