nsv428386
- Organism: Homo sapiens
- Study:nstd8 (Perry et al. 2008b)
- Variant Type:copy number variation
- Method Type:BAC aCGH
- Submitted on:NCBI36 (hg18)
- Variant Calls:23
- Validation:Not tested
- Clinical Assertions: No
- Region Size:266,880
- Publication(s):Perry et al. 2008
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1166 SVs from 87 studies. See in: genome view
Overlapping variant regions from other studies: 1166 SVs from 87 studies. See in: genome view
Overlapping variant regions from other studies: 512 SVs from 26 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv428386 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000022.11 | Chr22 | 21,328,921 | 21,595,800 |
| nsv428386 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000022.10 | Chr22 | 21,683,210 | 21,950,089 |
| nsv428386 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000022.9 | Chr22 | 20,013,210 | 20,280,089 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv453965 | copy number loss | HGDP00450 | BAC aCGH | Probe signal intensity | 88 |
| nssv453966 | copy number loss | HGDP00460 | BAC aCGH | Probe signal intensity | 67 |
| nssv453967 | copy number loss | HGDP00471 | BAC aCGH | Probe signal intensity | 73 |
| nssv453968 | copy number loss | HGDP00473 | BAC aCGH | Probe signal intensity | 64 |
| nssv453969 | copy number loss | NA19189 | BAC aCGH | Probe signal intensity | 94 |
| nssv453970 | copy number loss | NA19225 | BAC aCGH | Probe signal intensity | 71 |
| nssv453971 | copy number loss | HGDP00449 | BAC aCGH | Probe signal intensity | 126 |
| nssv453972 | copy number loss | HGDP00462 | BAC aCGH | Probe signal intensity | 83 |
| nssv453973 | copy number loss | HGDP00463 | BAC aCGH | Probe signal intensity | 90 |
| nssv453974 | copy number loss | HGDP00472 | BAC aCGH | Probe signal intensity | 65 |
| nssv453976 | copy number loss | HGDP00984 | BAC aCGH | Probe signal intensity | 75 |
| nssv453977 | copy number loss | HGDP00986 | BAC aCGH | Probe signal intensity | 82 |
| nssv453978 | copy number loss | HGDP01087 | BAC aCGH | Probe signal intensity | 75 |
| nssv453979 | copy number loss | HGDP01088 | BAC aCGH | Probe signal intensity | 78 |
| nssv453980 | copy number loss | HGDP01089 | BAC aCGH | Probe signal intensity | 65 |
| nssv453981 | copy number loss | HGDP01093 | BAC aCGH | Probe signal intensity | 95 |
| nssv453982 | copy number loss | HGDP01094 | BAC aCGH | Probe signal intensity | 92 |
| nssv453983 | copy number loss | NA18498 | BAC aCGH | Probe signal intensity | 97 |
| nssv453984 | copy number loss | NA18916 | BAC aCGH | Probe signal intensity | 90 |
| nssv453985 | copy number loss | NA19096 | BAC aCGH | Probe signal intensity | 100 |
| nssv453987 | copy number loss | NA19113 | BAC aCGH | Probe signal intensity | 122 |
| nssv453988 | copy number loss | NA19181 | BAC aCGH | Probe signal intensity | 87 |
| nssv453989 | copy number loss | NA19257 | BAC aCGH | Probe signal intensity | 86 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv453965 | Remapped | Perfect | NC_000022.11:g.(?_ 21328921)_(2145144 9_?)del | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 21,328,921 | 21,451,449 |
| nssv453966 | Remapped | Perfect | NC_000022.11:g.(?_ 21328921)_(2145144 9_?)del | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 21,328,921 | 21,451,449 |
| nssv453967 | Remapped | Perfect | NC_000022.11:g.(?_ 21328921)_(2145144 9_?)del | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 21,328,921 | 21,451,449 |
| nssv453968 | Remapped | Perfect | NC_000022.11:g.(?_ 21328921)_(2145144 9_?)del | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 21,328,921 | 21,451,449 |
| nssv453969 | Remapped | Perfect | NC_000022.11:g.(?_ 21328921)_(2145144 9_?)del | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 21,328,921 | 21,451,449 |
| nssv453970 | Remapped | Perfect | NC_000022.11:g.(?_ 21328921)_(2145144 9_?)del | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 21,328,921 | 21,451,449 |
| nssv453971 | Remapped | Perfect | NC_000022.11:g.(?_ 21328921)_(2159580 0_?)del | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 21,328,921 | 21,595,800 |
| nssv453972 | Remapped | Perfect | NC_000022.11:g.(?_ 21328921)_(2159580 0_?)del | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 21,328,921 | 21,595,800 |
| nssv453973 | Remapped | Perfect | NC_000022.11:g.(?_ 21328921)_(2159580 0_?)del | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 21,328,921 | 21,595,800 |
| nssv453974 | Remapped | Perfect | NC_000022.11:g.(?_ 21328921)_(2159580 0_?)del | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 21,328,921 | 21,595,800 |
| nssv453976 | Remapped | Perfect | NC_000022.11:g.(?_ 21328921)_(2159580 0_?)del | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 21,328,921 | 21,595,800 |
| nssv453977 | Remapped | Perfect | NC_000022.11:g.(?_ 21328921)_(2159580 0_?)del | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 21,328,921 | 21,595,800 |
| nssv453978 | Remapped | Perfect | NC_000022.11:g.(?_ 21328921)_(2159580 0_?)del | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 21,328,921 | 21,595,800 |
| nssv453979 | Remapped | Perfect | NC_000022.11:g.(?_ 21328921)_(2159580 0_?)del | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 21,328,921 | 21,595,800 |
| nssv453980 | Remapped | Perfect | NC_000022.11:g.(?_ 21328921)_(2159580 0_?)del | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 21,328,921 | 21,595,800 |
| nssv453981 | Remapped | Perfect | NC_000022.11:g.(?_ 21328921)_(2159580 0_?)del | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 21,328,921 | 21,595,800 |
| nssv453982 | Remapped | Perfect | NC_000022.11:g.(?_ 21328921)_(2159580 0_?)del | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 21,328,921 | 21,595,800 |
| nssv453983 | Remapped | Perfect | NC_000022.11:g.(?_ 21328921)_(2159580 0_?)del | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 21,328,921 | 21,595,800 |
| nssv453984 | Remapped | Perfect | NC_000022.11:g.(?_ 21328921)_(2159580 0_?)del | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 21,328,921 | 21,595,800 |
| nssv453985 | Remapped | Perfect | NC_000022.11:g.(?_ 21328921)_(2159580 0_?)del | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 21,328,921 | 21,595,800 |
| nssv453987 | Remapped | Perfect | NC_000022.11:g.(?_ 21328921)_(2159580 0_?)del | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 21,328,921 | 21,595,800 |
| nssv453988 | Remapped | Perfect | NC_000022.11:g.(?_ 21328921)_(2159580 0_?)del | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 21,328,921 | 21,595,800 |
| nssv453989 | Remapped | Perfect | NC_000022.11:g.(?_ 21328921)_(2159580 0_?)del | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 21,328,921 | 21,595,800 |
| nssv453965 | Remapped | Perfect | NC_000022.10:g.(?_ 21683210)_(2180573 8_?)del | GRCh37.p13 | First Pass | NC_000022.10 | Chr22 | 21,683,210 | 21,805,738 |
| nssv453966 | Remapped | Perfect | NC_000022.10:g.(?_ 21683210)_(2180573 8_?)del | GRCh37.p13 | First Pass | NC_000022.10 | Chr22 | 21,683,210 | 21,805,738 |
| nssv453967 | Remapped | Perfect | NC_000022.10:g.(?_ 21683210)_(2180573 8_?)del | GRCh37.p13 | First Pass | NC_000022.10 | Chr22 | 21,683,210 | 21,805,738 |
| nssv453968 | Remapped | Perfect | NC_000022.10:g.(?_ 21683210)_(2180573 8_?)del | GRCh37.p13 | First Pass | NC_000022.10 | Chr22 | 21,683,210 | 21,805,738 |
| nssv453969 | Remapped | Perfect | NC_000022.10:g.(?_ 21683210)_(2180573 8_?)del | GRCh37.p13 | First Pass | NC_000022.10 | Chr22 | 21,683,210 | 21,805,738 |
| nssv453970 | Remapped | Perfect | NC_000022.10:g.(?_ 21683210)_(2180573 8_?)del | GRCh37.p13 | First Pass | NC_000022.10 | Chr22 | 21,683,210 | 21,805,738 |
| nssv453971 | Remapped | Perfect | NC_000022.10:g.(?_ 21683210)_(2195008 9_?)del | GRCh37.p13 | First Pass | NC_000022.10 | Chr22 | 21,683,210 | 21,950,089 |
| nssv453972 | Remapped | Perfect | NC_000022.10:g.(?_ 21683210)_(2195008 9_?)del | GRCh37.p13 | First Pass | NC_000022.10 | Chr22 | 21,683,210 | 21,950,089 |
| nssv453973 | Remapped | Perfect | NC_000022.10:g.(?_ 21683210)_(2195008 9_?)del | GRCh37.p13 | First Pass | NC_000022.10 | Chr22 | 21,683,210 | 21,950,089 |
| nssv453974 | Remapped | Perfect | NC_000022.10:g.(?_ 21683210)_(2195008 9_?)del | GRCh37.p13 | First Pass | NC_000022.10 | Chr22 | 21,683,210 | 21,950,089 |
| nssv453976 | Remapped | Perfect | NC_000022.10:g.(?_ 21683210)_(2195008 9_?)del | GRCh37.p13 | First Pass | NC_000022.10 | Chr22 | 21,683,210 | 21,950,089 |
| nssv453977 | Remapped | Perfect | NC_000022.10:g.(?_ 21683210)_(2195008 9_?)del | GRCh37.p13 | First Pass | NC_000022.10 | Chr22 | 21,683,210 | 21,950,089 |
| nssv453978 | Remapped | Perfect | NC_000022.10:g.(?_ 21683210)_(2195008 9_?)del | GRCh37.p13 | First Pass | NC_000022.10 | Chr22 | 21,683,210 | 21,950,089 |
| nssv453979 | Remapped | Perfect | NC_000022.10:g.(?_ 21683210)_(2195008 9_?)del | GRCh37.p13 | First Pass | NC_000022.10 | Chr22 | 21,683,210 | 21,950,089 |
| nssv453980 | Remapped | Perfect | NC_000022.10:g.(?_ 21683210)_(2195008 9_?)del | GRCh37.p13 | First Pass | NC_000022.10 | Chr22 | 21,683,210 | 21,950,089 |
| nssv453981 | Remapped | Perfect | NC_000022.10:g.(?_ 21683210)_(2195008 9_?)del | GRCh37.p13 | First Pass | NC_000022.10 | Chr22 | 21,683,210 | 21,950,089 |
| nssv453982 | Remapped | Perfect | NC_000022.10:g.(?_ 21683210)_(2195008 9_?)del | GRCh37.p13 | First Pass | NC_000022.10 | Chr22 | 21,683,210 | 21,950,089 |
| nssv453983 | Remapped | Perfect | NC_000022.10:g.(?_ 21683210)_(2195008 9_?)del | GRCh37.p13 | First Pass | NC_000022.10 | Chr22 | 21,683,210 | 21,950,089 |
| nssv453984 | Remapped | Perfect | NC_000022.10:g.(?_ 21683210)_(2195008 9_?)del | GRCh37.p13 | First Pass | NC_000022.10 | Chr22 | 21,683,210 | 21,950,089 |
| nssv453985 | Remapped | Perfect | NC_000022.10:g.(?_ 21683210)_(2195008 9_?)del | GRCh37.p13 | First Pass | NC_000022.10 | Chr22 | 21,683,210 | 21,950,089 |
| nssv453987 | Remapped | Perfect | NC_000022.10:g.(?_ 21683210)_(2195008 9_?)del | GRCh37.p13 | First Pass | NC_000022.10 | Chr22 | 21,683,210 | 21,950,089 |
| nssv453988 | Remapped | Perfect | NC_000022.10:g.(?_ 21683210)_(2195008 9_?)del | GRCh37.p13 | First Pass | NC_000022.10 | Chr22 | 21,683,210 | 21,950,089 |
| nssv453989 | Remapped | Perfect | NC_000022.10:g.(?_ 21683210)_(2195008 9_?)del | GRCh37.p13 | First Pass | NC_000022.10 | Chr22 | 21,683,210 | 21,950,089 |
| nssv453965 | Submitted genomic | NC_000022.9:g.(?_2 0013210)_(20135738 _?)del | NCBI36 (hg18) | NC_000022.9 | Chr22 | 20,013,210 | 20,135,738 | ||
| nssv453966 | Submitted genomic | NC_000022.9:g.(?_2 0013210)_(20135738 _?)del | NCBI36 (hg18) | NC_000022.9 | Chr22 | 20,013,210 | 20,135,738 | ||
| nssv453967 | Submitted genomic | NC_000022.9:g.(?_2 0013210)_(20135738 _?)del | NCBI36 (hg18) | NC_000022.9 | Chr22 | 20,013,210 | 20,135,738 | ||
| nssv453968 | Submitted genomic | NC_000022.9:g.(?_2 0013210)_(20135738 _?)del | NCBI36 (hg18) | NC_000022.9 | Chr22 | 20,013,210 | 20,135,738 | ||
| nssv453969 | Submitted genomic | NC_000022.9:g.(?_2 0013210)_(20135738 _?)del | NCBI36 (hg18) | NC_000022.9 | Chr22 | 20,013,210 | 20,135,738 | ||
| nssv453970 | Submitted genomic | NC_000022.9:g.(?_2 0013210)_(20135738 _?)del | NCBI36 (hg18) | NC_000022.9 | Chr22 | 20,013,210 | 20,135,738 | ||
| nssv453971 | Submitted genomic | NC_000022.9:g.(?_2 0013210)_(20280089 _?)del | NCBI36 (hg18) | NC_000022.9 | Chr22 | 20,013,210 | 20,280,089 | ||
| nssv453972 | Submitted genomic | NC_000022.9:g.(?_2 0013210)_(20280089 _?)del | NCBI36 (hg18) | NC_000022.9 | Chr22 | 20,013,210 | 20,280,089 | ||
| nssv453973 | Submitted genomic | NC_000022.9:g.(?_2 0013210)_(20280089 _?)del | NCBI36 (hg18) | NC_000022.9 | Chr22 | 20,013,210 | 20,280,089 | ||
| nssv453974 | Submitted genomic | NC_000022.9:g.(?_2 0013210)_(20280089 _?)del | NCBI36 (hg18) | NC_000022.9 | Chr22 | 20,013,210 | 20,280,089 | ||
| nssv453976 | Submitted genomic | NC_000022.9:g.(?_2 0013210)_(20280089 _?)del | NCBI36 (hg18) | NC_000022.9 | Chr22 | 20,013,210 | 20,280,089 | ||
| nssv453977 | Submitted genomic | NC_000022.9:g.(?_2 0013210)_(20280089 _?)del | NCBI36 (hg18) | NC_000022.9 | Chr22 | 20,013,210 | 20,280,089 | ||
| nssv453978 | Submitted genomic | NC_000022.9:g.(?_2 0013210)_(20280089 _?)del | NCBI36 (hg18) | NC_000022.9 | Chr22 | 20,013,210 | 20,280,089 | ||
| nssv453979 | Submitted genomic | NC_000022.9:g.(?_2 0013210)_(20280089 _?)del | NCBI36 (hg18) | NC_000022.9 | Chr22 | 20,013,210 | 20,280,089 | ||
| nssv453980 | Submitted genomic | NC_000022.9:g.(?_2 0013210)_(20280089 _?)del | NCBI36 (hg18) | NC_000022.9 | Chr22 | 20,013,210 | 20,280,089 | ||
| nssv453981 | Submitted genomic | NC_000022.9:g.(?_2 0013210)_(20280089 _?)del | NCBI36 (hg18) | NC_000022.9 | Chr22 | 20,013,210 | 20,280,089 | ||
| nssv453982 | Submitted genomic | NC_000022.9:g.(?_2 0013210)_(20280089 _?)del | NCBI36 (hg18) | NC_000022.9 | Chr22 | 20,013,210 | 20,280,089 | ||
| nssv453983 | Submitted genomic | NC_000022.9:g.(?_2 0013210)_(20280089 _?)del | NCBI36 (hg18) | NC_000022.9 | Chr22 | 20,013,210 | 20,280,089 | ||
| nssv453984 | Submitted genomic | NC_000022.9:g.(?_2 0013210)_(20280089 _?)del | NCBI36 (hg18) | NC_000022.9 | Chr22 | 20,013,210 | 20,280,089 | ||
| nssv453985 | Submitted genomic | NC_000022.9:g.(?_2 0013210)_(20280089 _?)del | NCBI36 (hg18) | NC_000022.9 | Chr22 | 20,013,210 | 20,280,089 | ||
| nssv453987 | Submitted genomic | NC_000022.9:g.(?_2 0013210)_(20280089 _?)del | NCBI36 (hg18) | NC_000022.9 | Chr22 | 20,013,210 | 20,280,089 | ||
| nssv453988 | Submitted genomic | NC_000022.9:g.(?_2 0013210)_(20280089 _?)del | NCBI36 (hg18) | NC_000022.9 | Chr22 | 20,013,210 | 20,280,089 | ||
| nssv453989 | Submitted genomic | NC_000022.9:g.(?_2 0013210)_(20280089 _?)del | NCBI36 (hg18) | NC_000022.9 | Chr22 | 20,013,210 | 20,280,089 |