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dbVar

Database of genomic structural variation

nsv4038316

Organism: Homo sapiens

Study:nstd166 (gnomAD Structural Variants)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:770

Publication(s):gnomAD_Structural_Variants

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 20 SVs from 6 studies. See in: genome view

Remapped(Score: Perfect):40,246,681-40,247,450

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv4038316	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000001.11	Chr1	40,246,681	40,247,450
nsv4038316	Submitted genomic		GRCh37.p13	Primary Assembly		NC_000001.10	Chr1	40,712,353	40,713,122

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv15851088	deletion	Sequencing	Other

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv15851088	Remapped	Perfect	NC_000001.11:g.402 46681_40247450del	GRCh38.p12	First Pass	NC_000001.11	Chr1	40,246,681	40,247,450
nssv15851088	Submitted genomic		NC_000001.10:g.407 12353_40713122del	GRCh37.p13		NC_000001.10	Chr1	40,712,353	40,713,122

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv15851088	4.6e-005	1	21694

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