nsv3918815
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37, GRCh38, NCBI36
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:25,677,457
- Description:GRCh38/hg38 5p15.33-14.1(chr5:22149-25699605)x1 AND See cases
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 88417 SVs from 141 studies. See in: genome view
Overlapping variant regions from other studies: 88450 SVs from 141 studies. See in: genome view
Overlapping variant regions from other studies: 23083 SVs from 40 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Assembly | Assembly Unit | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|
| nsv3918815 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000005.10 | Chr5 | 22,149 | 25,699,605 |
| nsv3918815 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000005.9 | Chr5 | 22,149 | 25,699,714 |
| nsv3918815 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000005.8 | Chr5 | 75,149 | 25,735,471 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv15147956 | copy number loss | Multiple | Multiple | See cases | Pathogenic | ClinVar | RCV000133768.5, VCV000144286.2 | 1 |
Variant Call Placement Information
| Variant Call ID | Placement Type | HGVS | Assembly | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|
| nssv15147956 | Submitted genomic | NC_000005.10:g.(?_ 22149)_(25699605_? )del | GRCh38 (hg38) | NC_000005.10 | Chr5 | 22,149 | 25,699,605 |
| nssv15147956 | Submitted genomic | NC_000005.9:g.(?_2 2149)_(25699714_?) del | GRCh37 (hg19) | NC_000005.9 | Chr5 | 22,149 | 25,699,714 |
| nssv15147956 | Submitted genomic | NC_000005.8:g.(?_7 5149)_(25735471_?) del | NCBI36 (hg18) | NC_000005.8 | Chr5 | 75,149 | 25,735,471 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv15147956 | GRCh37: NC_000005.9:g.(?_22149)_(25699714_?)del, GRCh38: NC_000005.10:g.(?_22149)_(25699605_?)del, NCBI36: NC_000005.8:g.(?_75149)_(25735471_?)del | copy number loss | not provided | See cases | Pathogenic | ClinVar | RCV000133768.5, VCV000144286.2 | 1 |