nsv3918094
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37, GRCh38, NCBI36
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:16,113,158
- Description:GRCh38/hg38 3q13.2-21.3(chr3:112620977-128734134)x1 AND See cases
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 36590 SVs from 131 studies. See in: genome view
Overlapping variant regions from other studies: 36585 SVs from 131 studies. See in: genome view
Overlapping variant regions from other studies: 9937 SVs from 38 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Assembly | Assembly Unit | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|
| nsv3918094 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000003.12 | Chr3 | 112,620,977 | 128,734,134 |
| nsv3918094 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000003.11 | Chr3 | 112,339,824 | 128,452,977 |
| nsv3918094 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000003.10 | Chr3 | 113,822,514 | 129,935,667 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv15136463 | copy number loss | Multiple | Multiple | See cases | Pathogenic | ClinVar | RCV000139033.7, VCV000150138.2 | 1 |
Variant Call Placement Information
| Variant Call ID | Placement Type | HGVS | Assembly | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|
| nssv15136463 | Submitted genomic | NC_000003.12:g.(?_ 112620977)_(128734 134_?)del | GRCh38 (hg38) | NC_000003.12 | Chr3 | 112,620,977 | 128,734,134 |
| nssv15136463 | Submitted genomic | NC_000003.11:g.(?_ 112339824)_(128452 977_?)del | GRCh37 (hg19) | NC_000003.11 | Chr3 | 112,339,824 | 128,452,977 |
| nssv15136463 | Submitted genomic | NC_000003.10:g.(?_ 113822514)_(129935 667_?)del | NCBI36 (hg18) | NC_000003.10 | Chr3 | 113,822,514 | 129,935,667 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv15136463 | GRCh37: NC_000003.11:g.(?_112339824)_(128452977_?)del, GRCh38: NC_000003.12:g.(?_112620977)_(128734134_?)del, NCBI36: NC_000003.10:g.(?_113822514)_(129935667_?)del | copy number loss | not provided | See cases | Pathogenic | ClinVar | RCV000139033.7, VCV000150138.2 | 1 |