nsv3915804
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37, GRCh38, NCBI36
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:6,263,015
- Description:GRCh38/hg38 11q13.4-14.1(chr11:71969881-78232895)x1 AND See cases
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 14829 SVs from 107 studies. See in: genome view
Overlapping variant regions from other studies: 14838 SVs from 107 studies. See in: genome view
Overlapping variant regions from other studies: 3509 SVs from 28 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Assembly | Assembly Unit | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|
| nsv3915804 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000011.10 | Chr11 | 71,969,881 | 78,232,895 |
| nsv3915804 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000011.9 | Chr11 | 71,680,927 | 77,943,941 |
| nsv3915804 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000011.8 | Chr11 | 71,358,575 | 77,621,589 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv15134308 | copy number loss | Multiple | Multiple | See cases | Pathogenic | ClinVar | RCV000052709.4, VCV000058917.1 | 1 |
Variant Call Placement Information
| Variant Call ID | Placement Type | HGVS | Assembly | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|
| nssv15134308 | Submitted genomic | NC_000011.10:g.(?_ 71969881)_(7823289 5_?)del | GRCh38 (hg38) | NC_000011.10 | Chr11 | 71,969,881 | 78,232,895 |
| nssv15134308 | Submitted genomic | NC_000011.9:g.(?_7 1680927)_(77943941 _?)del | GRCh37 (hg19) | NC_000011.9 | Chr11 | 71,680,927 | 77,943,941 |
| nssv15134308 | Submitted genomic | NC_000011.8:g.(?_7 1358575)_(77621589 _?)del | NCBI36 (hg18) | NC_000011.8 | Chr11 | 71,358,575 | 77,621,589 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv15134308 | GRCh37: NC_000011.9:g.(?_71680927)_(77943941_?)del, GRCh38: NC_000011.10:g.(?_71969881)_(78232895_?)del, NCBI36: NC_000011.8:g.(?_71358575)_(77621589_?)del | copy number loss | de novo | See cases | Pathogenic | ClinVar | RCV000052709.4, VCV000058917.1 | 1 |