nsv3909324
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:2,939,967
- Description:GRCh37/hg19 19p13.3(chr19:260911-3200875)x3 AND not provided
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 19735 SVs from 115 studies. See in: genome view
Overlapping variant regions from other studies: 19735 SVs from 115 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv3909324 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000019.10 | Chr19 | 260,911 | 3,200,877 |
| nsv3909324 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000019.9 | Chr19 | 260,911 | 3,200,875 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv15153914 | copy number gain | Multiple | Multiple | not provided | Pathogenic | ClinVar | RCV000684094.1, VCV000564605.1 | 3 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv15153914 | Remapped | Perfect | NC_000019.10:g.(?_ 260911)_(3200877_? )dup | GRCh38.p12 | First Pass | NC_000019.10 | Chr19 | 260,911 | 3,200,877 |
| nssv15153914 | Submitted genomic | NC_000019.9:g.(?_2 60911)_(3200875_?) dup | GRCh37 (hg19) | NC_000019.9 | Chr19 | 260,911 | 3,200,875 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv15153914 | GRCh37: NC_000019.9:g.(?_260911)_(3200875_?)dup | copy number gain | germline | not provided | Pathogenic | ClinVar | RCV000684094.1, VCV000564605.1 | 3 |