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dbVar

Database of genomic structural variation

nsv3909287

Organism: Homo sapiens

Study:nstd102 (Clinical Structural Variants)
Variant Type:copy number variation
Method Type:Multiple
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: Yes
Region Size:52,151

Description:GRCh37/hg19 7p21.3(chr7:12725406-12777556)x1 AND not provided

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 288 SVs from 53 studies. See in: genome view

Remapped(Score: Perfect):12,685,781-12,737,931

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv3909287	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000007.14	Chr7	12,685,781	12,737,931
nsv3909287	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000007.13	Chr7	12,725,406	12,777,556

Variant Call Information

Variant Call ID	Type	Method	Analysis	Subject Phenotype	Clinical Interpretation	Source of Interpretation	ClinVar ID	Copy number
nssv15151464	copy number loss	Multiple	Multiple	not provided	Uncertain significance	ClinVar	RCV000682759.1, VCV000563270.1	1

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15151464	Remapped	Perfect	NC_000007.14:g.(?_ 12685781)_(1273793 1_?)del	GRCh38.p12	First Pass	NC_000007.14	Chr7	12,685,781	12,737,931
nssv15151464	Submitted genomic		NC_000007.13:g.(?_ 12725406)_(1277755 6_?)del	GRCh37 (hg19)		NC_000007.13	Chr7	12,725,406	12,777,556

No validation data were submitted for this variant

Clinical Assertions

Variant Call ID	HGVS	Type	Allele Origin	Subject Phenotype	Clinical Interpretation	Source of Interpretation	ClinVar ID	Copy number
nssv15151464	GRCh37: NC_000007.13:g.(?_12725406)_(12777556_?)del	copy number loss	germline	not provided	Uncertain significance	ClinVar	RCV000682759.1, VCV000563270.1	1

No genotype data were submitted for this variant

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