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dbVar

Database of genomic structural variation

nsv3905981

Organism: Homo sapiens

Study:nstd102 (Clinical Structural Variants)
Variant Type:copy number variation
Method Type:Multiple
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: Yes
Region Size:3,254

Description:GRCh37/hg19 20q11.22(chr20:33240403-33243656)x0 AND not provided

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 195 SVs from 47 studies. See in: genome view

Remapped(Score: Perfect):34,652,599-34,655,852

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv3905981	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000020.11	Chr20	34,652,599	34,655,852
nsv3905981	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000020.10	Chr20	33,240,403	33,243,656

Variant Call Information

Variant Call ID	Type	Method	Analysis	Subject Phenotype	Clinical Interpretation	Source of Interpretation	ClinVar ID	Copy number
nssv15163423	copy number loss	Multiple	Multiple	not provided	Benign	ClinVar	RCV000741177.2, VCV000604541.2	0

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15163423	Remapped	Perfect	NC_000020.11:g.(?_ 34652599)_(3465585 2_?)del	GRCh38.p12	First Pass	NC_000020.11	Chr20	34,652,599	34,655,852
nssv15163423	Submitted genomic		NC_000020.10:g.(?_ 33240403)_(3324365 6_?)del	GRCh37 (hg19)		NC_000020.10	Chr20	33,240,403	33,243,656

No validation data were submitted for this variant

Clinical Assertions

Variant Call ID	HGVS	Type	Allele Origin	Subject Phenotype	Clinical Interpretation	Source of Interpretation	ClinVar ID	Copy number
nssv15163423	GRCh37: NC_000020.10:g.(?_33240403)_(33243656_?)del	copy number loss	unknown	not provided	Benign	ClinVar	RCV000741177.2, VCV000604541.2	0

No genotype data were submitted for this variant

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