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dbVar

Database of genomic structural variation

nsv3903669

Organism: Homo sapiens

Study:nstd102 (Clinical Structural Variants)
Variant Type:copy number variation
Method Type:Multiple
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: Yes
Region Size:9,492,469

Description:GRCh37/hg19 15q15.3-21.3(chr15:43759773-53252240)x1 AND not provided

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 23314 SVs from 124 studies. See in: genome view

Remapped(Score: Perfect):43,467,575-52,960,043

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv3903669	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000015.10	Chr15	43,467,575	52,960,043
nsv3903669	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000015.9	Chr15	43,759,773	53,252,240

Variant Call Information

Variant Call ID	Type	Method	Analysis	Subject Phenotype	Clinical Interpretation	Source of Interpretation	ClinVar ID	Copy number
nssv15155452	copy number loss	Multiple	Multiple	not provided	Pathogenic	ClinVar	RCV000683686.1, VCV000564197.1	1

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15155452	Remapped	Perfect	NC_000015.10:g.(?_ 43467575)_(5296004 3_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	43,467,575	52,960,043
nssv15155452	Submitted genomic		NC_000015.9:g.(?_4 3759773)_(53252240 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	43,759,773	53,252,240

No validation data were submitted for this variant

Clinical Assertions

Variant Call ID	HGVS	Type	Allele Origin	Subject Phenotype	Clinical Interpretation	Source of Interpretation	ClinVar ID	Copy number
nssv15155452	GRCh37: NC_000015.9:g.(?_43759773)_(53252240_?)del	copy number loss	germline	not provided	Pathogenic	ClinVar	RCV000683686.1, VCV000564197.1	1

No genotype data were submitted for this variant

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