nsv3903275
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:12,168,916
- Description:GRCh37/hg19 7q32.1-34(chr7:127295698-139524358) AND not specified
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 31829 SVs from 126 studies. See in: genome view
Overlapping variant regions from other studies: 31787 SVs from 126 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv3903275 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000007.14 | Chr7 | 127,655,644 | 139,824,559 |
| nsv3903275 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000007.13 | Chr7 | 127,295,698 | 139,524,358 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID |
|---|---|---|---|---|---|---|---|
| nssv17970255 | copy number loss | Multiple | Multiple | not specified | Pathogenic | ClinVar | RCV002053727.3, VCV001527395.3 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv17970255 | Remapped | Good | NC_000007.14:g.(?_ 127655644)_(139824 559_?)del | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 127,655,644 | 139,824,559 |
| nssv17970255 | Submitted genomic | NC_000007.13:g.(?_ 127295698)_(139524 358_?)del | GRCh37 (hg19) | NC_000007.13 | Chr7 | 127,295,698 | 139,524,358 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID |
|---|---|---|---|---|---|---|---|
| nssv17970255 | GRCh37: NC_000007.13:g.(?_127295698)_(139524358_?)del | copy number loss | germline | not specified | Pathogenic | ClinVar | RCV002053727.3, VCV001527395.3 |