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dbVar

Database of genomic structural variation

nsv3902567

Organism: Homo sapiens

Study:nstd102 (Clinical Structural Variants)
Variant Type:copy number variation
Method Type:Multiple
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: Yes
Region Size:15,546

Description:GRCh37/hg19 10q23.1(chr10:83884894-83900439)x1 AND not provided

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 241 SVs from 60 studies. See in: genome view

Remapped(Score: Perfect):82,125,138-82,140,683

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv3902567	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000010.11	Chr10	82,125,138	82,140,683
nsv3902567	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000010.10	Chr10	83,884,894	83,900,439

Variant Call Information

Variant Call ID	Type	Method	Analysis	Subject Phenotype	Clinical Interpretation	Source of Interpretation	ClinVar ID	Copy number
nssv15157074	copy number loss	Multiple	Multiple	not provided	Benign	ClinVar	RCV000737207.2, VCV000600571.2	1

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15157074	Remapped	Perfect	NC_000010.11:g.(?_ 82125138)_(8214068 3_?)del	GRCh38.p12	First Pass	NC_000010.11	Chr10	82,125,138	82,140,683
nssv15157074	Submitted genomic		NC_000010.10:g.(?_ 83884894)_(8390043 9_?)del	GRCh37 (hg19)		NC_000010.10	Chr10	83,884,894	83,900,439

No validation data were submitted for this variant

Clinical Assertions

Variant Call ID	HGVS	Type	Allele Origin	Subject Phenotype	Clinical Interpretation	Source of Interpretation	ClinVar ID	Copy number
nssv15157074	GRCh37: NC_000010.10:g.(?_83884894)_(83900439_?)del	copy number loss	unknown	not provided	Benign	ClinVar	RCV000737207.2, VCV000600571.2	1

No genotype data were submitted for this variant

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