nsv3902289
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:66,290
- Description:GRCh37/hg19 8q21.2(chr8:86021909-86088198)x3 AND not provided
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 230 SVs from 39 studies. See in: genome view
Overlapping variant regions from other studies: 230 SVs from 39 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nsv3902289 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000008.11 | Chr8 | 85,109,674 | 85,175,963 |
nsv3902289 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000008.10 | Chr8 | 86,021,909 | 86,088,198 |
Variant Call Information
Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
---|---|---|---|---|---|---|---|---|
nssv15169308 | copy number gain | Multiple | Multiple | not provided | Benign | ClinVar | RCV000747687.2, VCV000611051.2 | 3 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nssv15169308 | Remapped | Perfect | NC_000008.11:g.(?_ 85109674)_(8517596 3_?)dup | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 85,109,674 | 85,175,963 |
nssv15169308 | Submitted genomic | NC_000008.10:g.(?_ 86021909)_(8608819 8_?)dup | GRCh37 (hg19) | NC_000008.10 | Chr8 | 86,021,909 | 86,088,198 |
No validation data were submitted for this variant
Clinical Assertions
Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
---|---|---|---|---|---|---|---|---|
nssv15169308 | GRCh37: NC_000008.10:g.(?_86021909)_(86088198_?)dup | copy number gain | unknown | not provided | Benign | ClinVar | RCV000747687.2, VCV000611051.2 | 3 |