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dbVar

Database of genomic structural variation

nsv3900811

Organism: Homo sapiens

Study:nstd102 (Clinical Structural Variants)
Variant Type:copy number variation
Method Type:Multiple
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: Yes
Region Size:1,448,917

Description:GRCh37/hg19 10q24.32-24.33(chr10:103891057-105339973)x1 AND not provided

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 3901 SVs from 92 studies. See in: genome view

Remapped(Score: Perfect):102,131,300-103,580,216

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv3900811	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000010.11	Chr10	102,131,300	103,580,216
nsv3900811	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000010.10	Chr10	103,891,057	105,339,973

Variant Call Information

Variant Call ID	Type	Method	Analysis	Subject Phenotype	Clinical Interpretation	Source of Interpretation	ClinVar ID	Copy number
nssv15162411	copy number loss	Multiple	Multiple	not provided	Likely pathogenic	ClinVar	RCV000683260.1, VCV000563771.1	1

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15162411	Remapped	Perfect	NC_000010.11:g.(?_ 102131300)_(103580 216_?)del	GRCh38.p12	First Pass	NC_000010.11	Chr10	102,131,300	103,580,216
nssv15162411	Submitted genomic		NC_000010.10:g.(?_ 103891057)_(105339 973_?)del	GRCh37 (hg19)		NC_000010.10	Chr10	103,891,057	105,339,973

No validation data were submitted for this variant

Clinical Assertions

Variant Call ID	HGVS	Type	Allele Origin	Subject Phenotype	Clinical Interpretation	Source of Interpretation	ClinVar ID	Copy number
nssv15162411	GRCh37: NC_000010.10:g.(?_103891057)_(105339973_?)del	copy number loss	germline	not provided	Likely pathogenic	ClinVar	RCV000683260.1, VCV000563771.1	1

No genotype data were submitted for this variant

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