nsv3898723
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:468,745
- Description:GRCh37/hg19 12q24.23(chr12:118258061-118726805)x3 AND not provided
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1432 SVs from 70 studies. See in: genome view
Overlapping variant regions from other studies: 1432 SVs from 70 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv3898723 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000012.12 | Chr12 | 117,820,256 | 118,289,000 |
| nsv3898723 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000012.11 | Chr12 | 118,258,061 | 118,726,805 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv15154601 | copy number gain | Multiple | Multiple | not provided | Uncertain significance | ClinVar | RCV000683436.1, VCV000563947.1 | 3 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv15154601 | Remapped | Perfect | NC_000012.12:g.(?_ 117820256)_(118289 000_?)dup | GRCh38.p12 | First Pass | NC_000012.12 | Chr12 | 117,820,256 | 118,289,000 |
| nssv15154601 | Submitted genomic | NC_000012.11:g.(?_ 118258061)_(118726 805_?)dup | GRCh37 (hg19) | NC_000012.11 | Chr12 | 118,258,061 | 118,726,805 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv15154601 | GRCh37: NC_000012.11:g.(?_118258061)_(118726805_?)dup | copy number gain | germline | not provided | Uncertain significance | ClinVar | RCV000683436.1, VCV000563947.1 | 3 |